Equus caballus (horse): 100059341
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Entry
100059341 CDS
T01058
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100059341 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100059341 (SUPT6H)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100059341 (SUPT6H)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100059341 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
100059341
NCBI-ProteinID:
XP_001504206
Ensembl:
ENSECAG00000020521
VGNC:
50603
LinkDB
All DBs
Position
11:42918593..42948933
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVSRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSTFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLIIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggctgaggagtcagaggaagaatacaacgatgaaggc
gaagtggtgtcccgggtcaccaagaaatttgtggaagaggaggatgacgatgaggaggag
gaagaggagaacctagatgatcaggatgagcaaggcaacctgaaaggctttatcaatgat
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggggattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaagtaccgacgt
gtcaaaaaaatgtcagatgacgaggatgacgatgaggaggaatatggcaaggaggaacat
gaaaaagaggctattgcagaggaaatcttccaggatggggaaggggaagaagggcaggag
gctgtggaggcccccatggctcctccagaggaggaggaggaagatgatgaagagtcagac
attgacgacttcattgtggatgatgatggacagcctctgaaaaaacctaagtggaggaaa
aagcttcccggatacacagatgcggccctgcaagaagctcaggagatttttggtgtggac
tttgactatgatgaatttgagaaatacaatgagtacgatgaagaactggaggaagagtat
gagtatgaggatgatgaggctgagggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatctttgagatgtatgaacccagtgagctggaaagcagc
cacctcacagatcaggacaatgaaatccgagccactgacctgcctgagaggttccagctt
cgctccatcccagtcaagggggctgaagatgatgaactagaagaagaagctgactggatc
tacaggaatgcttttgccacaccaaccatttctcttcaggaaagctgtgattacctagac
cgagggcagccaaccagcacgttcagtcgaaaagggcccagcacaattcagaagattaaa
gaggccctgggcttcatgcgaaatcagcattttgaggtgccttttattgccttctaccga
aaggagtatgtggagcctgagttgcacattaatgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttatcagtacgagcaaatctctgctgaccctgacaaaccccttgctgatggcatc
cgggctctggacaccaccgacatggaaaggctcaaggatgtgcagtcaatggatgagctg
aaagatgtctacaaccatttcctgctttattatggtcgtgacatccccaagatgcagaat
gctgccaaggccagccgcaagaagctgaagcgtgtaagagaagagggagatgaggaaggt
gaaggtgaggaagcagaagatgaggaacagagagggccggagctcaaacaggcttctcgc
cgagacatgtacaccatttgccagagtgctgggctagatgggctggccaaaaagtttggg
cttactcctgagcagtttggggagaacctccgggacagctatcagcggcatgagacagag
cagtttcctgcggagcccttggagctggccaaggattatgtttgcagtcagttccctaca
ccggaagctgtgctggaaggtgcccgctacatggtagccctgcagattgctcgagagcca
cttgtccggcaggtgctgaggcagactttccaggagagagccaagctaaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactatgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatatgcctagctgaa
gatgaagggctgctcatcattgacatcagcatagatatgaagggggtagaaggctatggc
aatgaccagacatatttcgaagagatcaagcagttttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcagcgcaccatggccatcgagcgggctttgcagcagttc
ctctacgtgcagatggccaaagagctcaagaacaaactgctggccgaagccaaagaatat
gtcataaaggcctgtagtcgaaagctgtacaactggttaagggtggcaccctaccggcca
gatcagcaggtggaggaagatgatgactttatggatgagaaccaagggaagggcatccga
gttctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaat
ggtgagggagaagtgacagacttcctccggctgccccattttaccaaacgtcgaactgcg
tggagagaggaagaacgagaaaagaaggctcaagacattgaaaccctaaagaaatttctt
ctgaataaaaagcctcacgtggtgacagttgcaggagagaacagggacgcgcagatgttg
attgaggatgtgaagcgcattgtgcatgagctggaccagggccaacagctgtcctctatt
ggggtggagctggttgacaacgagttggccattctctatatgaacagcaagaaatcggag
gcagagttccgggattaccccccagtgctgagacaggctgtctccctggctcggcgcatc
caagatcctctgattgaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctc
aagtttcaccccttgcaggagcatgtggtgaaagaggagctgctcaacgccttgtactgt
gaatttatcaaccgagttaatgaggttggggtcgatgtcaatcgtgccattgcccaccct
tacagccaggccttaatccagtatgtctgtggcctgggacctcggaaagggacccatctc
ctgaagatcctgaagcagaacaacaccaggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacacagcc
tccctgggggacagcactgattcatatatagaagtccttgacggttcccgagtccaccct
gagacctatgaatgggctaggaagatggcagtggatgctctagaatatgatgaatcagct
gaggatgccaaccctgcaggagcccttgaagaaatcttggaaaacccagagcgactcaag
gacctggaccttgatgcctttgcggaagaactggagaggcagggctatggtgacaaacac
atcaccctctacgacatccgggcagagctgagctgtcgatataaggatctgcggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagaaacc
ttctacatcggaaagctcatcatctgcaatgtcactggcatcgcccacaggcgtccacag
ggtgagagctatgaccaggcaatccgcaatgatgagacagggctatggcagtgccccttc
tgtcagcaggacaatttccctgaactgagcgaggtctggaaccactttgacagcggttca
tgcccaggccaggccatcggtgtcaaaacacgactagacaatggtgtcaccggcttcatc
cctaccaaattcctcagtgacaaagtggtaaagcggccagaggaacgagtgaaggtggga
atgactgttcactgccgcataatgaagattgacatcgagaagtttagtgcagacctgacc
tgccgtacctcagacctcatggacaggaacaacgagtggaaactgcccaaggacacctac
tatgattttgatgctgaggcagcagaccataagcaggaggaggacatgaagcggaagcag
cagcggaccacatacatcaagcgagtgattgcacacccatccttccataatataaatttc
aagcaagcagaaaagatgatggagaccatggaccagggtgatgtgattatccggccgagc
agcaagggcgaaaatcacctgacagtgacctggaaggtcagtgacggcatctaccagcac
gtggatgtgcgggaagaaggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aacagtgaggagtttgaagacttggatgagatcgttgcccgctatgtccagcccatggca
tcctttgcccgggaccttctgaaccacaagtattatcaggactgcagcggtggggaccgg
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaacggtgactccagaaggattccggtaccgaggccaaatc
tttccaactgtgaatggacttttcagatggtttaaggatcattaccaagatcctgtacca
ggcatcacccccagtagcagcagcaggacccggacacctgcttctatcaatgctacgcca
gctaacatcaaccttgcagatctgacacgggctgtgaacgccctgccccagaacatgacc
tcgcagatgttcagtgccattgcagctgtgacaggccaaggacagaaccctaatgccacc
ccagcccagtgggcctctagccagtatggctatggtggcagtggagggggcagcagcgct
tatcacgtgttcccaacgccagcccagcagccagtggccacaccactaatgacccccagc
tactcttacacgaccccaagccagcccatcaccacaccacagtaccaccagctacaggcc
agcaccaccccgcagtctgcccaggcccagccccagccttcctccagctcgcggcaacgg
cagcagcagccaaagtccaacagccacgcagccatcgactgggggaagatggcggaacag
tggcttcaggagaaggaggcagagcggcggaaacagaagcagcggctgacacctcggccc
tcccccagccccatgatcgaaagcacccccatgtccattgctggcgatgccaccccgctt
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
