Equus caballus (horse): 100059404
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Entry
100059404 CDS
T01058
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb04714
Thermogenesis
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100059404 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100059404 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100059404 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100059404 (SMARCC2)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100059404 (SMARCC2)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100059404 (SMARCC2)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100059404 (SMARCC2)
PBAF complex
100059404 (SMARCC2)
GBAF(ncBAF) complex
100059404 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
100059404
NCBI-ProteinID:
XP_023499538
Ensembl:
ENSECAG00000020679
VGNC:
23324
UniProt:
A0A3Q2HU44
LinkDB
All DBs
Position
6:complement(74748158..74767266)
Genome browser
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDEEKGKEGDGEKE
SEKSDGDAIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN
LPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaataagtccttgtctagcctggttgtacagttgctacagtttcag
gaggaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggagggtccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaacccatcgcgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtgcagaataactgcctgtcgcgacct
aacattttcctttgcccagaaattgaacccaaactgctagggaaattaaaggacattatc
aagagacaccagggaaccgtcactgaggacaagaacaatgcctcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaaaagagataagcag
gttcttctgcactggggctactatcctgacagttatgacacgtggattccagccagtgaa
attgaagcatctgttgaagatgctccaactcctgagaaacctaggaaggtgcatgcaaag
tggatcctggacacagacaccttcaacgaatggatgaatgaggaagactacgaagtgaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagcccagattcagatcgacgggacaagaagggcggaaactataagaagaggaag
cgctccccatctccttcaccgaccccagaagctaagaagaaaaatgctaagaaaggtccc
tcaacaccttacactaagtcaaaacgtggccaccgagaagaggagcaagaagacctgaca
aaggacatggatgagccctcaccggtccccaacgtagaagaggtgacactgcccaaaaca
gtcaacactaagaaggactccgagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgagaacagtacg
gggaacaagggggagcagaccaagaatccagaccttcacgaggacaacgtgactgagcag
acccaccacatcatcatccccagctacgctgcctggtttgactataatagtgttcatgcc
attgagcggagggctctccccgagttcttcaacggcaagaacaagtccaagaccccagaa
atctacctggcctatcggaacttcatgattgacacttaccggctgaacccccaagagtat
ctcacctccaccgcctgccgcaggaacctggcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccacccacctctcacttccacgtcttggcggacacaccatcaggg
ctggtgcctctgcagcccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaaacca
acagacatgcagaactttgggctgcgcacagacatgtacacgaagaagaacgtcccctcc
aagagcaaggctgcagccagcgccactcgagagtggacagaacaggagaccctgctgctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcggagcatgtgggaagc
cgcacccaggacgagtgcatcttgcattttcttcgtcttcccatcgaagatccgtacctg
gaggactcagaggcctccctggggcccctggcctaccagcccatccccttcagtcagtcg
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatcctcgagttgcc
tctgctgctgcgaagtctgccctagaagagttctccaaaatgaaggaagaggtacccaca
gctttggtggaggcccatgttcggaaggtagaagaagcagccaaagtgacgggcaaggcg
gacccagccttcggcctggaaagcagtggcattgcaggaaccacctctgatgagcctgag
cggatcgaggagagcgggactgacgaggcacgggcagagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgtagaggaagaagcaaaggagaaa
accagcgaggctcccaagaaggatgaagagaaagggaaagaaggcgacggcgagaaggag
tcagaaaagagtgacggggacgcgatagttgaccctgagaaggagaaggagccaaaggaa
gggcaggaggaagtgctgaaggaagtggtggagtcggagggggagaggaagacaaaggtg
gagcgggacatcggcgagggcaacctctccactgctgccgctgcagctctggccgctgcc
gccgtgaaggccaagcacttggctgctgttgaagaaaggaagatcaaatctctggtggcc
ctgctggtggagacccaaatgaaaaagttggagatcaaactccggcactttgaagaactg
gagacgatcatggaccgggagcgagaagcactggagtatcagagacagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtatgcggagatgagggcccggcagcag
cactttcaacaaatgcaccaacagcaacagcagccaccgccagccttgcccccaggctcc
cagcctatccctcctacaggcgccgctgggccacccacagtccacggcttggccatggct
ccagcttctgtggcccctgctcctgctggcagtggggcccctcctggaagcttgggcccc
tctgaacagattgggcaggcagggtcaacagcagggccacagcagcagcaaccagctgga
gccccccagcctggggcagtcccaccaggggtacccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctcctgctccatccatcatcccatttggtagtctagccgactccatcagtattaac
cttccccctcctaacctgcatgggcatcaccaccatctcccgttcgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggcactcccttgcctccagaccccacggcccctagcccaggcacggtcacccctgtg
ccacctccacagtga
DBGET
integrated database retrieval system
