Equus caballus (horse): 100059651
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Entry
100059651 CDS
T01058
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X5
KO
K12821
pre-mRNA-processing factor 40
Organism
ecb
Equus caballus (horse)
Pathway
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100059651 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecb03041
]
100059651 (PRPF40B)
Spliceosome [BR:
ecb03041
]
Complex A
U1 snRNP components
U1 related factors
100059651 (PRPF40B)
Complex B
100059651 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
100059651
NCBI-ProteinID:
XP_014596345
Ensembl:
ENSECAG00000020691
VGNC:
21888
UniProt:
A0A3Q2HBA3
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Position
6:68176579..68234713
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AA seq
867 aa
AA seq
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MPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMMPGM
LMPAVPVTAATAPGADTASSAVGGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVL
KSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQQQQL
PQTLQPQPPQPQPDPPPAPPGPTSVPTGLLEPEPGGSEDCDVSEAAQPLEQGFLQQPEEG
PSSSAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKM
VVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTT
RYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGM
SSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARL
RERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLF
KFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTF
NSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFE
QITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEEELPP
PSLRPSKRRRRNPSESGSEPSSSLDSGESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKK
KTKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAELPNRSPGFGIKKEKTGW
DTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgccccctccaggaatccccccgccctttcctccgatggggctaccccccatgagtcag
agaccaccagctatcccccccatgccacctggcatcatgcccccaatgcttccaccaatg
ggggcgccaccaccactcacacagatcccaggaatggtacctcccatgatgccaggaatg
ctgatgccagcggtgcccgtcactgcagcgacggctccaggtgcggacaccgccagctct
gctgtgggtgggacaggtcctccgagggccctatggagtgagcatgtggcccctgatggg
cgcatctactactacaatgctgacgacaagcagtccgtgtgggagaagcccagcgtgctc
aagtccaaggcagagctgctgctgtcccagtgtccctggaaagagtacaagtcggacaca
ggcaaaccttactactataacaaccagagtaaggagtcccgctggacccggcccaaggac
ctggatgacctggaggctctagttaaacaggaggctgcagggaaacagcagcagcagctg
ccacagacactacagccgcagcctcctcagccacaacctgaccccccacctgcgcctcct
ggccccacctcagtgcccacaggcctcctagaacctgagccaggtgggagtgaagattgc
gatgtgtcagaggctgcccagcccctggagcaggggttccttcagcagccggaggagggc
cccagcagttctgctggacagcatcagccaccacagcaggaggaggaagaatcaaagcca
gaaccagagaggtctggcctcagttggagcaatcgggagaaggcaaagcaggccttcaag
gagctgctaagggacaaggctgtcccctccaacgcctcgtgggaacaggccatgaagatg
gtggtcaccgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggcattc
aatgcctacaaggcgcagcgggagaaggaggagaaagaagaggcccggctaagggccaag
gaggccaagcagaccttgcagcatttcctggagcagcacgaacgcatgacctccaccacc
cgctaccggcgggcagaacagacctttggggagctggaggtctgggctgtggtccctgag
agggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggagaaggaa
caggccaagcagctccggcgccgcaacatccaggccctgaagagcatcctggatggaatg
agtagcgtcaacttccaaaccacatggtcccaggcccagcagtacctcatggataacccc
agctttgctcaggaccaccagctgcagaacatggacaaggaagatgcgctgatctgcttt
gaggagcacatccgagctttggagagggaggaggaggaggagcgagagcgggcccgtctt
cgagagcggcgccagcaacgcaagaaccgggaggccttccagaccttcctggacgagctg
cacgagactgggcagctgcactctatgtccacctggatggagctgtacccagcggtcagc
actgatgtccgctttgccaacatgctgggccagccgggctccacccctctggacttgttc
aagttctatgtggaagagttgaaggcacgattccatgatgagaagaagatcattaaggac
atccttaaggaccggggcttctgcgtggaggtgaacacagcctttgaagacttcgcccac
gtcataagctttgacaagagggctgctgcgctggacgcaggcaacatcaagctgaccttc
aatagtctgttggagaaagcagaggcgcgggagagagagagggagaaggaggaggcacga
aggatgcggcgcagggaagctgcctttcgaagcatgctgaggcaggccgtgcctgctctg
gagctgggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagcctttgag
cagatcaccctggagtcggagcggatccggctcttccgggagtttctgcaggtactggag
actgaatgccagcacctccacaccaaaggccgaaaacatggcagaaagggcaagaagcac
catcgcaagcgttcccactcgccctcaggctctgagtcagaagaggaggagctgccccca
ccgtctctccggccctccaagcggaggaggcggaacccctcggagtcaggctctgagccc
tcttcctcacttgattccggtgaaagtgggggtgctgcccttggaggacgaggctcccca
tcctcccgccttctccttggatcagatcatggtcttcggaaagccaagaaaccaaaaaag
aaaactaagaagagaagacacaagtcgaacagtcctgagagtgagacagaccctgaggag
aaagctggcaaggagagtgatgaaaaagagccagaacaggacaaggacagggagctccgg
cgagcagagctccctaaccgctccccaggctttggaatcaagaaggagaagacgggctgg
gacacgtcggaaagcgagctgagcgagggtgagctggaaaggcggcggcggacacttctg
cagcagctggatgaccaccagtga
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