Equus caballus (horse): 100059823
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Entry
100059823 CDS
T01058
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecb04121
]
100059823 (TRIM50)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100059823 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
TRIM_CC
U-box
zf-Nse
Sina_RING
zf-RING_4
Prok-RING_4
SSNA1
zf-ANAPC11
CC_BshC
zf_RING_Vps8_fungal
CCDC93_CC
COG2_N
Baculo_IE-1
Ninein_long_CC
Cut12
DUF1644
Motif
Other DBs
NCBI-GeneID:
100059823
NCBI-ProteinID:
XP_001504541
Ensembl:
ENSECAG00000014578
UniProt:
F7CZ34
LinkDB
All DBs
Position
13:complement(11337434..11349930)
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AA seq
487 aa
AA seq
DB search
MAWQVSVPELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSRHLDSELRCPVCRQEV
DCSSSPPNVSLARVIEALQLPGDPEPTVCAHHRNPLSLFCEKDQELICGLCGLLGSHQQH
RVTPVSTVYSRMKEELAALISDLKQEQQKVDEHIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKAHCLEGVEGHTRGLVASLDMQLEQARGTRERLVQTKLVLEQFSNESHHEF
IRKYHSMVSRADLQQARPLEGVFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD
WRLGVIKGTASRKGKLSKSPEHGMWLIGLKEGRVYEAFGCPRVPLPVAGHPHRIGIYLHY
EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGHLT
LPQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaggtgagcgtgcccgagctggaggaccgcctccagtgccccatctgcctg
gaggtcttcaaggagcccctgatgctgcagtgcggccactcctactgcaagggctgcctg
gtgtccctgtcccgccacctggactcggagctgcgctgccccgtgtgccggcaggaggtg
gattgcagcagctccccacccaatgtctccctggcgcgggtgatcgaagccctgcagctc
cccggggacccagagcctacggtctgtgcacaccaccggaacccgctcagcctcttctgt
gagaaggaccaggagctcatctgcggcctctgcggcctgctgggctcccaccagcagcac
cgggtcacgccggtctccaccgtctacagccgcatgaaggaggagcttgcggccctcatc
tctgacctgaagcaggagcagcagaaggtggatgagcatattgccaaactggtgaacaac
aggacccggattgtcaatgagtccgatgtcttcagctgggtgattcgccgagagttccag
gagctgcaccacctggtagatgaggagaaggcccactgtctggagggggtggagggtcac
acccggggcctcgtggcctccctggacatgcagctggagcaggcccggggcactcgggag
cggctggtccagaccaagcttgtgctggagcagttcagtaacgagagtcaccacgagttc
atccggaagtaccactccatggtctccagagcagatctccagcaggcccggcccttggaa
ggcgtgttcagccccatctccttcaagccaggcctccaccaggctgacatcaagctgact
gtgtggaaaaggctcttccgcaaggttctgccagccccggagtccctcaagctggaccct
gccactgcccaccctctcctggagctctccaagggcaacacggtggtgcagtgtggcctc
ctggcccagcggcgtgccagccagcctgagcgcttcgactacagtacctgtgtcctggcc
agccggggcttctcctgcggccgccactactgggaggtggtggtgggcagtaagagtgat
tggcgcctgggggtcatcaagggcacagccagccgcaagggcaagctgagcaagtcccca
gagcatggcatgtggctcatcggcctgaaggagggccgggtgtacgaggccttcggctgc
ccacgggtgcccctgcctgtggctggccacccccaccgcattggcatctacttgcactat
gagcaaggagagctcaccttcttcgatgctgaccgccctgatgacctgcggccactctac
acattccaggctgacttccagggcaagctctaccccatcctggacacatgctggcacgaa
aggggcagcaactcactgcccatggtgttgcccccgcccagtgggcctggccacctcacc
ctcccacagcccaccaagctgtag
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integrated database retrieval system
