Equus caballus (horse): 100059851
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Entry
100059851 CDS
T01058
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb04714
Thermogenesis
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100059851 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100059851 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100059851 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100059851 (SMARCD1)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100059851 (SMARCD1)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100059851 (SMARCD1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100059851 (SMARCD1)
PBAF complex
100059851 (SMARCD1)
GBAF(ncBAF) complex
100059851 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
100059851
NCBI-ProteinID:
XP_023499295
Ensembl:
ENSECAG00000021885
VGNC:
23325
UniProt:
A0A3Q2I511
LinkDB
All DBs
Position
6:68593055..68608200
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AA seq
552 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVWSKLSVHLLPSSTEPQDLRPQSSTEVTAAAGPASLPLSGFC
KLATNLREPLVW
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcaggtttccagtctgtggctccaagcggcggtgccggagcctctgga
ggggccggcgcggcggcggctctgggcccgggcgggactccggggcctcctgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcacctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaat
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcttatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggctttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttctcttccttttttaagtccttg
gtgatcgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggatggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgtcctgctgatgctggattaccagcccccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagacccgtccagtgatcatccaagcactgtgg
caatacattaagacgcataagctccaggaccctcatgagcgggagtttgtcatctgtgac
aagtacctccagcagatctttgagtctcagcgtatgaagttttcagagatccctcaacgc
ctccacgccttgcttatgccaccagagcccatcatcattaaccatgtcatcagtgttgac
ccgaatgatcagaaaaagacggcttgttatgacattgatgtggaagtggatgataccttg
aagacccagatgaattctttcctcttgtctactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagaaactatcaatcaactgaagacccagcgggaattc
atgctgagctttgccagagaccctcagggtttcatcaacgactggcttcagtcccagtgc
cgggacctcaagaccatgaccgacgtggtgggtaacccagaggaagagcgccgagctgaa
ttctacttccagccttgggctcaggaggccgtgtgccgatacttctactccaaggtttgg
agcaaactctccgttcacttgttgccctctagcactgagccccaggatctgagaccacaa
agctccacagaggtcacagctgctgcaggtcctgcatcccttcctctttctggcttctgc
aaactcgccactaacctgagggagcccctagtgtggtag
DBGET
integrated database retrieval system
