Equus caballus (horse): 100059980
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Entry
100059980 CDS
T01058
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X2
KO
K10755
replication factor C subunit 2/4
Organism
ecb
Equus caballus (horse)
Pathway
ecb03030
DNA replication
ecb03410
Base excision repair
ecb03420
Nucleotide excision repair
ecb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100059980 (RFC2)
03410 Base excision repair
100059980 (RFC2)
03420 Nucleotide excision repair
100059980 (RFC2)
03430 Mismatch repair
100059980 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecb03032
]
100059980 (RFC2)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100059980 (RFC2)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100059980 (RFC2)
DNA replication proteins [BR:
ecb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100059980 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
100059980 (RFC2)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100059980 (RFC2)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100059980 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
100059980 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
AAA_24
AAA_11
Rad17
DNAX_ATPase_lid
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_5
MipZ
AAA_18
AAA_28
ABC_tran
AAA_25
AAA_30
Gp44_lid
AAA_23
NTPase_1
MeaB
RNA_helicase
SLFN-g3_helicase
FtsK_SpoIIIE
DUF815
Motif
Other DBs
NCBI-GeneID:
100059980
NCBI-ProteinID:
XP_014585417
Ensembl:
ENSECAG00000000367
VGNC:
22319
UniProt:
A0A9L0S5Y4
LinkDB
All DBs
Position
13:complement(12042154..12065260)
Genome browser
AA seq
368 aa
AA seq
DB search
MASRGGASGGGKSGGRMEVRESGGGAAEPGAQDPAPAPGKAPGSAGHYELPWVEKYRPVK
LNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELN
ASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTR
FALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMTIIEKENVPYTDDGLEAIVFTAQ
GDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNADIDGAYKILAHLW
HLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHVKIADGVNSLLQMAGLLARLCQ
KTMAPVAS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacggggcggggcctcgggcggcgggaagagcggcgggagaatggaggtgcgg
gagagcggcggtggagcggccgagcccggggcccaggaccctgctccggcccccggcaaa
gcccccggcagcgcaggccactacgagctgccatgggttgaaaaatatagaccagtaaag
ttgaatgaaattgttgggaatgaagacactgtgagcagactggaggtctttgcaagagaa
gggaatgtgcccaatattatcatcgctggccccccaggaaccggcaaaacgacaagcatc
ctgtgtctggctcgagccctgctgggccccgcgctcaaggatgctgtgttggaactcaat
gcttcaaatgacaggggcattgatgttgtgaggaacaaaatcaaaatgtttgcccagcag
aaagtcacgcttcccaaagggcggcacaagatcatcatcctggacgaagccgacagcatg
accgatggagcccagcaagccttgaggagaaccatggaaatctactccaaaacgacccgc
tttgctcttgcttgtaatgcatcagataaaatcatagagcccatccagtcccggtgcgct
gtcctccgctacacgaagctcaccgatgcccaggtgcttgcgcggctcatgaccataatc
gagaaggagaacgtgccctacaccgacgatggcttggaagccattgtcttcaccgcccag
ggagacatgaggcaggcattgaacaacttgcagtcgaccttctcgggattcggctttatt
aacagtgagaatgtgttcaaggtctgcgacgagccgcaccccttgctggtgaaggagatg
atccagcactgcgtgaacgccgacattgacggagcgtacaagatccttgcgcacctgtgg
catctcggctattccccagaggacatcattggcaacatttttcgagtgtgtaaaaccttc
caaatggcagaatacttgaaactggagtttattaaggagatcggatacactcacgtgaaa
atagcggacggcgtgaactccctgctacagatggcggggctcctggcccggctgtgtcag
aagaccatggccccggtggccagctag
DBGET
integrated database retrieval system
