Equus caballus (horse): 100060134
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Entry
100060134 CDS
T01058
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
ecb
Equus caballus (horse)
Pathway
ecb04659
Th17 cell differentiation
ecb04710
Circadian rhythm
ecb05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100060134 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
100060134 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
100060134 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100060134 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecb03310
]
100060134 (RORC)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100060134 (RORC)
Nuclear receptors [BR:
ecb03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100060134 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100060134
NCBI-ProteinID:
XP_001916080
Ensembl:
ENSECAG00000000918
VGNC:
22505
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All DBs
Position
5:42109835..42132661
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AA seq
518 aa
AA seq
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MDRAPQRHRRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQQQQQREQAAKTPPEGGQGADPLPCTLGLPDGQLPLGSSPDLPEASACPPGLLRAP
GSGPSYSNSLAKAGLNGASYHLEYSPERGKAEGRESFYSTGSQLTPNRCGLHFEEPRHPG
LGEPRQGPDSYCSPGFRSTTEAPYASLTETEHLVQNVCKSYRETCQLRLEDLLRQRSNIF
SREEVASYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSRSLSALRFSEDEIALY
TALVLINANRPGLQEKRKVEQLQYNLEMAFHHHLCKTHRQGILAKLPPKGKLRSLCSQHV
EKLQTFQHLHPIVVQAAFPPLYKELFSTEMESPEGLSE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccgccgagcctcacaggagctgctggctgcaaagaag
acccacacctcacaaatcgaagtgatcccttgcaaaatctgtggggacaagtcgtctggt
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccggagccagcag
tgtaacgtggcctactcttgcacccgtcagcagaactgccccatcgaccgcaccagccgg
aaccgatgccagcactgccgcctgcagaagtgcctggccctgggcatgtcccgagatgct
gtcaagttcggccgcatgtccaagaagcaaagggacagcctgcatgccgaagtgcagaag
caactgcagcagcagcagcagcagcaacgggaacaagcagccaagacccctcctgaagga
ggccaaggagcagaccccctcccctgcaccttggggctcccggatgggcagctgcccttg
ggctcctcgcctgacctgcctgaggcctctgcctgtccccctggcctcctgagagcccca
ggctctgggccttcctactccaatagcttggccaaggccggtctcaatggggcctcatac
cacctcgagtacagccctgagcggggcaaggctgagggcagagagagcttctatagcacg
ggcagccagctgacccccaatagatgtggacttcattttgaggaacccaggcatcctggg
cttggggaacccagacagggcccggacagctactgcagccccggtttccgcagcaccaca
gaggcaccttatgcttccctgacggagactgagcacttggtacagaacgtgtgtaagtcc
taccgagagacgtgtcagctgcggctggaggacctgctacggcagcgctccaacatcttc
tcccgggaggaggtggccagctaccagaggaagtcaatgtgggagatgtgggaacgctgt
gcccaccgcctcaccgaggccattcagtatgtggtggagtttgctaagaggctctcaggc
tttatggagctctgtcagaatgaccagatcgtgctactcaaagcaggagcaatggaagtg
gtgcttgtcaggatgtgccgggcctacaacgccgacaaccacacagtcttttttgaaggc
aaatacggtggcatggagctgttccgagccttgggctgcagtgagctcatcagctccatc
ttcgacttctcccgctccctgagtgccttacgcttttccgaggatgagattgccctctac
acagcccttgtcctcatcaacgccaaccggccaggactccaagagaaaaggaaggtagaa
cagctgcagtacaatctggaaatggcctttcatcaccatctctgcaagactcatcgccaa
ggcatcctggcaaagctaccacccaaggggaagcttcggagcctctgcagccagcatgtg
gaaaagctgcaaaccttccagcatctccaccccattgtggtccaagctgctttcccccca
ctctacaaggaactcttcagcactgaaatggagtcacctgaggggctgtctgagtga
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