Equus caballus (horse): 100060140
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Entry
100060140 CDS
T01058
Name
(RefSeq) nuclear RNA export factor 3 isoform X2
KO
K14284
nuclear RNA export factor
Organism
ecb
Equus caballus (horse)
Pathway
ecb03008
Ribosome biogenesis in eukaryotes
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
ecb05014
Amyotrophic lateral sclerosis
ecb05164
Influenza A
ecb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100060140
03015 mRNA surveillance pathway
100060140
03008 Ribosome biogenesis in eukaryotes
100060140
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100060140
05168 Herpes simplex virus 1 infection
100060140
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100060140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100060140
03009 Ribosome biogenesis [BR:
ecb03009
]
100060140
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100060140
mRNA cycle factors
Stress granule specific factors
100060140
Ribosome biogenesis [BR:
ecb03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100060140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
Motif
Other DBs
NCBI-GeneID:
100060140
NCBI-ProteinID:
XP_005614428
Ensembl:
ENSECAG00000009360
UniProt:
A0A5F5PZ71
LinkDB
All DBs
Position
X:85390380..85401025
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AA seq
607 aa
AA seq
DB search
MGRNNQPKFLKRRARGWGIYRRRYSNWSEEVSSGIHPSSHQQQDGDPETSDAPVDTAVRY
APYAIPPCHRRGTFQKQGQSHINMKREQKPPERKMEGNKQDETSGSWFKIMVPFGIKYDE
KWLLSLIQKQCSVPFTPVEFHYEKMQAQFFVENANIAFALKNINGKIWDKNNERISIFVS
PSDAPCSVQKELKSEKLTMNKRYDVSQQSLEVQRLHFDPALVTLGVEMVPNPRNDTAASL
QIHEESMLKLFPLNLSNTKPCQLAGLSTTMQNASIIKNLNLPSNEVKAAGKLDKGQGLEP
EEMSADRNSLCTTFPDKSTNISSILELFPKLLSLDSQESRPPTNFGIEAHKRLPTCKGSF
FESDALKSLVLQFLRRYYLIYDSGDRQGLLGAYLDEACFSLSIPFNPEDPAPSSLCEYVK
DNRNIKKLKDPYLRLQLLKSTKHDIVRSLCVLPTTQHDFSSFVVDQWLQTERVLCFSVNG
VFKEVVGKSQSSVRAFTRTFIIVPVSNSSLCILNDQLFVRDANPKETHSGLFIPVPTPAS
SSVPTLSQEQQEMVQAFSTQSGMNLQWSQKCLHDSHWDYTKAAQVLALLKAQCKIPEEAL
TQTDPGS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaataaccaacctaaattcttaaaaagaagagcaagaggctggggtatttac
cgaaggagatatagtaattggtctgaagaagtcagttctggcattcatccttcatctcac
cagcagcaagatggagatcctgaaacaagtgatgctcctgtggacacagcagtaagatat
gctccctatgccattccaccctgtcatcggagaggcacttttcagaaacaaggccaatcc
cacattaacatgaagagagagcaaaagcctccagagaggaaaatggaggggaacaagcag
gatgagacctcagggagctggttcaagatcatggttccatttggcataaaatatgatgag
aagtggctgctcagtttgattcagaagcaatgcagtgtccccttcaccccagtcgaattt
cactatgagaaaatgcaggcccagttcttcgttgagaatgccaacattgcctttgcattg
aagaatatcaacggcaagatttgggataagaataatgaaaggatatctatctttgtcagc
ccctctgatgcaccctgctctgtgcagaaggagctgaagtcagaaaagctgaccatgaac
aaacgatatgatgtctcccagcaatctcttgaagtccagagactccactttgaccctgcc
ttggtgacccttggtgtggaaatggtcccgaatcctagaaatgacacggctgcctccctg
cagatccatgaagagagcatgctcaagctttttcccttgaacctgagcaacacgaaaccc
tgccagctggctggcctgtccaccactatgcagaatgcctccatcatcaagaacttgaac
ctccccagcaacgaggtgaaggctgcagggaagttggacaagggccaagggctggagcca
gaagagatgagcgcagacagaaactccctgtgcaccaccttcccagataagtcaaccaac
ataagctccatcctggaattgttccccaagttgttaagcttggatagccaggagtcacgc
ccaccaactaactttggtattgaagcccacaagaggctaccaacctgcaagggaagcttc
tttgaatctgatgcgctgaagagtctggttctgcaattcctgcggcgatattacctgatc
tatgactctggagaccgacagggtcttctcggtgcttaccttgacgaggcctgtttctcc
ctgagcatccctttcaaccccgaggacccagccccaagcagcttgtgcgagtacgtcaag
gataacaggaatataaagaagctcaaggacccctacctgcggcttcagctgttgaagagt
acaaaacatgacatcgtgcgctctctctgtgtgttgcccacaactcagcatgacttcagc
tccttcgtggtggaccagtggctccagacagaaagggtgctgtgcttctctgtcaacggg
gtgttcaaggaagtggtaggaaagtctcagagttctgttcgtgccttcacacgaaccttc
atcattgtccctgtcagcaattccagtctgtgcatcctgaatgaccagctgtttgtgagg
gacgccaaccccaaggagactcacagtgggctcttcatcccagttcccacacccgcctcc
agctctgtgcccaccctctcccaggagcaacaggaaatggtgcaggctttctccacccag
tccggcatgaacctgcagtggtctcagaagtgccttcatgatagccactgggactacacc
aaagccgcacaggttctcgctctgctcaaggcccagtgcaagatcccagaggaggccctc
acacagactgatccaggatcctga
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