Equus caballus (horse): 100060154
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Entry
100060154 CDS
T01058
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100060154 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100060154 (FIP1L1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100060154 (FIP1L1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
100060154
NCBI-ProteinID:
XP_014594128
Ensembl:
ENSECAG00000019415
VGNC:
18045
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All DBs
Position
3:complement(80596467..80668313)
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AA seq
603 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKASSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRDRDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRER
RHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAT
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcct
ccatctggaattgaggatgaaactgctgaaaacggcgtacctaaaccgaaagtgaccgag
actgaagatgatagtgatagtgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaagacaggaggaagagtttatggaactacaggaacaaaagtcaaaggggtagac
cttgatgcacccggaagcattaatggagttccactcttggaggtggatttggattctttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacggatgggacttgaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaaacagcacttccatctacaaaagctgaatttacttctcct
ccttctttgttcaagactgggctcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccagttcaagcgttgggaagtggcaggatcgatatggg
agggccgaatcacccgatctaaggagattacctggggcaattgatgttattggtcagact
ataactatcagccgagtagaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccgcctccatttttc
cctccaggagctcctcccacccaccttccacctcctccgtttcttccacctcctccaact
gtcagcactgctccacctctgattccaccaccaggtattccaataactgtaccacctcca
ggttttcctcctccaccaggcgctccacctccatctcttataccaacaatagaaagtgga
cattcctctggttatgatagtcgttctgcacgtgcttttccttatgggaatgttgccttt
ccccaccttcctggttctgctccttcatggcctagtcttgtggacaccagcaagcaatgg
gactattatgcaagaagagagaaagaccgagatagagatagagacagagaccgagagcga
gaccgtgatcgggacagagaaagagaacgtaccagagagagggagagggagcgtgatcat
agccctacgccaagtgttttcaacagtgatgaagaacgctacagatatagggagtatgca
gaaagaggctatgagcgtcacagagcaagtcgagagaaagaagaacgacacagagaaaga
cgacacagagagaaagaggagacgagacacaagtcatctcgaagtaatagtaggcgtcgc
catgaaagtgaagagggagacagtcacaggagacacaagcacaaaaaatctaaaagaagc
aaagaaggaaaagaagctggcagtgagcctgcccctgaacaggagagcaccgaagctaca
cctgcagaatag
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