KEGG   Equus caballus (horse): 100060348
Entry
100060348         CDS       T01058                                 
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X3
  KO
K14562  Treacher Collins syndrome protein
Organism
ecb  Equus caballus (horse)
Pathway
ecb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100060348 (TCOF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecb03009]
    100060348 (TCOF1)
Ribosome biogenesis [BR:ecb03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100060348 (TCOF1)
SSDB
Motif
Pfam: Treacle
Other DBs
NCBI-GeneID: 100060348
NCBI-ProteinID: XP_014586064
LinkDB
Position
14:complement(26928704..26968903)
AA seq 1616 aa
MAEARKRRELLPLIYQHLLQAGYVRAAREVKEQSGQKSFPTQPVTLLDIYTHWQQTSEVG
RKRKAEEDAALQAKKTRVSDPISSSESSEEEEEEEAEAETSKATPRLASTNSSVVGAVLP
ASMKEKATAKTAKASKTVNSTLRPASGKAVAHLSGMASAGRADSSSEDTSTSSDETYVEV
KPSVKPPQVKASPAAAKESAGRRAAPTPGKAGAVTPQVRGGAVTPAGRAKKPEEDSESSE
EESESEEGAPEGTPSQGKAAEKSVWVKAASGSAEGTPGKGATPALTGKTGPAAAQAKAGR
PEEDSESSSEESDSEEETPAAKTPLQPSGKTPQVKAASVPTKESPRKGTTPAPPGKAGPV
AAQAKAGRPEEDSESSSGESDSDGEAPAARPLTSSSAQAKPLGKNSQVRAASTVGMGPSG
KGAVPAPPGKAASTATLVLVGKQEEDSESSSEESDSEREAPAQAKSSGKILQVKSATGPA
KGPPQKTGPVATQIKVERSKEDSESSEDESESEEEVAAAVTPAQAKPAMKTPQTKASPTK
GSPVTPASAKVPAARVGTPAPWKAEAVTSPACASSPAVARGTQRPEQDSSSSEESESEEE
KAPAVAVGQAKSVRKNPPAKAASAPTKGPSGQGNAPLLPGKAGPAVAQVKAEMHDDSESS
EEESDSEEVAATPAQVKPSVKTPQTKASPASARAALAPGPSSAVRKVVTAAAQAKQGSPA
KVKPPARTPQSSAISVRGQVSVLAGGKADAAAARAQPGPVRGSQEDSESSSEEDSDSEGA
APVPAQAKPPGKTPQLRTASAPTKGSPRKGAASAPPGKTGPTATQVGKQKEDSESSSQEE
SESEGAAPSQAKPSGKTPQVRTASAPTKGSPQKGAAPAPPGKTGPTASQAAKREENSESS
SEDDSDSEGVAPAQAKPSGKTTQVRTASAPIKGSPRKGAAPPPPGKTGPTATGPTATQAG
KQEEDSESSSEEESDSEGAAPAQAKPSGKTAQVRTASAPTKGSPRKGAAPAPPGKTGPTA
TQAGKREENSESSSEEESDSEGAVPAAVTPAQKEGASQTARSKTLGPALPEKKAQGSSES
SDEELPAGQVIKFPLIFVDPNRSPAGPAATPAQAQAASAPRKAQASESTARSSSSESEDE
DVVPATQCSTPAVRTNVVSVPPANPRTALRAGAVGASSGEEAGRASEGRKQEAQVTKKNP
AHLPLTQAALKVLVQKASEAQPPTARTPSSSGVDSALGTLPVTSPQSTPVPAKVTNRLGK
PKVPEVQRAVATSLGRPKAKASGTSDDSEDSSSCSSGSKEDAEATQRLVGAALSRRETLV
EETTAESSEEEVVAPSQSLLSGYATPGLTPANSQASKATPRPDPKPSVSSTPATKDALDG
KREVEPQQPAATMSPQTGRRDPGTTPQKPRKGAGSPQASMLALQSDITRRLLSEPWPLSE
AQVQASVVKVLTELLEQERKKAVDAAKESSRKGRVGRKRKLSEDQPAARTPKSKKKKQLA
AGEVGEGAVSPEKGPRTLKGKSKKDRASGDIKKKEKESLGQGAKEKPEGEPAMVSIVGED
PGNPKSKKEKKKTDKRKKDKEKKEKKKKAKKASTKAPDSLIQKKRKKKKKAAEQTV
NT seq 4851 nt   +upstreamnt  +downstreamnt
atggccgaggctaggaagcggcgggagctgcttcccttgatctaccagcacctgctgcag
gcgggctacgtgcgcgcggcgcgggaggtgaaggagcagagcggccagaaaagtttcccg
actcagcctgtaacccttctggacatctatacgcactggcagcaaacctcagaggttggc
cggaagcggaaggcagaggaagatgcggcactgcaggccaagaagacccgtgtgtcagac
cccattagcagctcggagagctcagaagaggaggaggaggaggaggcggaagctgaaacc
tccaaagccaccccaagactagcatctaccaactcctcagtggtgggggcagttttgcct
gcaagcatgaaagaaaaggccacggcaaagaccgcgaaagccagcaagacggtgaactcc
acgctacgccctgcctccgggaaggcagtggcccacctctctggaatggcatcggcaggc
cgggctgacagttccagtgaggacacctccacctcgagtgatgaaacatacgtggaggtg
aaaccctcagtaaaaccaccccaggtcaaagcctcgccagccgctgccaaagagtctgca
gggagaagggcagccccaacccctgggaaggcaggagctgtgacaccccaagtcagggga
ggtgccgtgaccccagctggcagggccaagaagccagaagaggactcagagagcagtgag
gaggaatctgagagtgaggagggggcccctgaggggacccccagccaggggaaggccgca
gagaaatctgtctgggtcaaagctgcctcaggttccgccgaggggacccctgggaaagga
gccaccccagcactcactgggaagacaggacctgcagctgcccaggccaaggcagggagg
ccagaggaggactcggagagcagcagcgaggagtcggacagtgaggaagagactccagct
gccaagaccccgctccagccctcagggaagaccccccaggtcaaagctgcctcagtcccc
accaaggagtcccctaggaaagggaccaccccagcaccccctggcaaggcagggcctgtg
gctgctcaggccaaggcggggaggccagaggaggactcagagagcagcagcggggagtcg
gacagtgacggggaggcgccagcagccaggcctctaacctccagctcagctcaggcaaag
cctttggggaaaaactcgcaggtcagagctgcctcgactgtgggcatggggccctcaggg
aagggtgccgtcccagcaccccctgggaaagcggcatctacagccaccttggtcctggtg
gggaagcaagaggaggactcggagagcagcagcgaggagtcagacagcgagcgggaggcg
ccagcccaggcaaagtcctcaggaaaaatcctccaggtcaaatctgccacaggtcccgcc
aagggaccccctcagaagacagggcctgtagccacccagatcaaggtcgaaaggtcgaag
gaagactcagagagcagcgaggatgagtcggagagtgaggaggaggtggctgcagccgtg
actccagcccaggcaaaacctgctatgaaaactcctcagaccaaggcctccccaacgaag
ggctcccccgtgacccccgcgtctgccaaggtccccgcagcgcgagtgggcacaccagcc
ccctggaaagcagaagcagtgacttcaccagcctgcgcatcgtccccagctgtggccagg
ggcacccagaggccagagcaggactcttcaagcagcgaggagtccgagagtgaggaagag
aaagctcctgctgtagcagtgggacaggcaaagtctgtgaggaaaaaccccccagcgaaa
gctgcctctgcgcccaccaaggggccatcagggcaggggaatgccccactactccctggg
aaggcagggcctgcagtggcccaggtcaaagctgagatgcacgatgactcagagagcagt
gaggaggaatccgacagtgaggaggtggcagcgactccagcacaggtgaagccctcagtg
aaaacgcctcagaccaaagccagcccagcttctgccagggcggctttagccccagggcca
tcatcagctgtcagaaaagtggtcactgcagctgctcaagccaagcaggggtccccagcc
aaggtaaagccaccagcaagaaccccccagagcagtgccatctcggtgaggggccaagtg
tctgtgctagcgggaggaaaggcagatgccgcagcagccagggcccagccggggccagtc
aggggctcacaggaggactcggagagcagcagtgaggaagattcggacagcgagggggcg
gcaccggtgccggcacaggcaaagcccccagggaagaccccccagctcagaactgcctca
gcccccaccaaggggtcccccagaaaaggggctgcctcagcaccccctgggaagacagga
cccacagccacccaggtggggaagcagaaggaagactcagagagcagcagccaggaggag
tcagagagcgagggggcagcgccctctcaggcaaagccctcagggaagacaccccaggtc
agaacggcctcagcccccaccaaagggtccccccagaaaggggctgccccagcaccccct
gggaagacaggacccacagccagccaggctgcgaagcgggaggagaactcggagagcagc
agtgaggacgattcggacagcgagggggtggcgcccgctcaggcaaagccctcagggaag
accacccaggtcagaactgcctcagcccccatcaaggggtcccctcggaaaggggctgcc
ccaccgccccctgggaagacaggacccacagccaccggacccacagccacccaggctggg
aagcaggaagaggactcggagagcagcagtgaggaggagtcagacagcgagggggcggcg
ccagctcaggcaaagccctcagggaagaccgcccaggtcagaactgcctcagcccccacc
aagggatccccccggaaaggggctgccccagcaccccctgggaagacaggacccacagcc
acccaggctgggaagcgggaggagaactcggagagcagcagtgaagaggagtcagacagc
gagggggcagtgccggcagctgtgacaccagcccagaaggagggtgcttcccaaactgcc
agaagcaagaccctgggcccagcacttccggagaagaaggcacaggggtcctcggagagc
agcgatgaggagctgcccgcaggccaggtgattaaattccctctgatttttgtcgaccct
aatcgtagtccagctggcccagctgctacccccgcacaagcccaggctgcgagcgccccg
aggaaggcccaggcctcggagagcacagccaggagctcctcctcagagagcgaggatgag
gacgtggtccccgctacgcagtgctcaactcctgctgtgagaaccaatgtggtgagcgtg
cccccggccaacccacggacagctctccgagccggcgccgttggggccagcagcggtgag
gaggccggccgggcgtcggaaggcaggaagcaggaggcgcaggtgacaaagaagaaccca
gctcatctcccgctgacccaggccgccctgaaggtccttgtccagaaagccagtgaggcc
cagcctcctactgccaggaccccatcttcaagtggggttgacagcgctctgggaactctc
cctgtgacgagtccccagagcacccctgtgccagccaaagtgaccaacaggcttggaaag
cccaaggttcctgaggtccagcgggccgtggccacttccttgggacgccccaaagccaag
gcctctgggacttcagatgacagtgaggacagcagcagctgctcttcagggagcaaggag
gatgctgaggcgacccagaggctggtaggtgcagccctttccaggagggagaccttggtg
gaggagaccacagcagagtccagcgaggaggaggtggtggcgccttcccagtctctcctc
tcaggttatgcaacccctgggctgactccagccaattcccaggcttcaaaggccactccc
aggccagaccccaaaccctcagtttcctctactccggctaccaaagatgccctagacggc
aagcgggaagtggagccccaacaaccagctgccaccatgtcccctcaaacaggcagaaga
gaccctggcaccacacctcagaagcccaggaagggggctgggagcccccaagcctcaatg
ctggcactgcagagcgacatcactcggcgcctcctgagcgaaccctggcccctgagcgag
gcccaggtccaggcgtcggtggtgaaggtcctgacagagctcctggagcaggaaaggaag
aaggccgtggatgccgccaaggagagcagcaggaagggccgggtgggtcgcaagcggaag
ctgtcggaagaccagccggctgccaggacccccaagagcaagaagaaaaagcagctcgcg
gccggggaggttggggagggtgctgtttccccagaaaagggccccaggactctcaagggg
aaatccaagaaagacagagcaagtggtgacatcaagaagaaggagaaggagtctcttggc
caaggggccaaggagaagccagaaggggagccggcgatggtgtcaattgtgggtgaagac
ccaggcaacccaaagagcaagaaggagaagaagaaaactgacaagagaaaaaaagacaag
gaaaagaaggaaaagaagaagaaagcaaagaaggcctccaccaaagctcctgactcacta
atccagaagaaaaggaagaaaaagaagaaggcggcagagcagactgtctga

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