Equus caballus (horse): 100060584
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Entry
100060584 CDS
T01058
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100060584 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
100060584 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100060584 (LSM7)
03041 Spliceosome [BR:
ecb03041
]
100060584 (LSM7)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100060584 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
100060584 (LSM7)
Spliceosome [BR:
ecb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100060584 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100060584
NCBI-ProteinID:
XP_023500139
LinkDB
All DBs
Position
7:complement(1518479..1523099)
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AA seq
156 aa
AA seq
DB search
MSAGPRRRRRQMFPSNAPPRPAAPAPCVRRACARGRGQRARRRRLRRTARPGKMADKEKK
KKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYVRDPDDQYKLTED
TRPLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQEA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggtccccgccgcaggcgtcgtcagatgtttcccagcaacgccccgccgcgc
cccgccgcgcctgcgccgtgtgtgcgccgcgcctgcgcgcgggggcgaggtcaaagggcg
cggcgacggcgcctgcgcagaacggcgcggcccggcaagatggcggacaaagagaagaag
aagaaggagagtatcttggacctgtccaagtacatcgacaagacgatccgggtgaagttc
caggggggccgcgaagccagcggaatcctgaagggctttgacccgctgctcaaccttgtg
ctggatggcaccatcgagtacgtgagagaccccgacgaccagtacaagctcacagaggac
acgcggccgctgggcctggtggtgtgcaggggcacctcggtggtgctcatctgcccgcag
gacggcatggaggccatccccaaccccttcgtccagcagcaggaggcctag
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