Equus caballus (horse): 100060904
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Entry
100060904 CDS
T01058
Symbol
TNRC18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X1
Organism
ecb
Equus caballus (horse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
DUF4537
Motif
Other DBs
NCBI-GeneID:
100060904
NCBI-ProteinID:
XP_023510961
LinkDB
All DBs
Position
13:complement(4201957..4286168)
Genome browser
AA seq
2970 aa
AA seq
DB search
MDGRDFGPPRSVHGPPPPLLSGLAMDSHRVGAATAGRLPASGLPGPLPPGKYMAGLNLHP
HPGEAFLGSFVASGMGPSASSHGSPVPLPSDLSFRSPTPSNLPMVQLWAAHAHEGFSHLP
SGLYPSYLHLNHLEPPSSGSPLLSQLGQPSIFETQKDGFYLPGPGAAGALHSHAPSSRTP
GGHSSGTQAKGSSREGAAKERAGRGGEPPPLFGKKDPRAREDAAGPRGVVDLTQEARAEG
RQDRGPPRLAERLSPFLAEPGPPRAPGTGPAESKGKNLPPPPPALSLCNGAADAGLPALV
AKEAARQDESARLRRAEALLPGPCPCPSPLPPPPRRPRQGPARAPAAPAGPFAAPQPASA
GVYTIFPTAAAREPGREHRVVAPTFVPSVEAFDERPGPIQIASQARDARAREREVARPGV
LQAPPGSPRPPPERPEKSSVIRSLKRPQPAEAPPARAARASPDPRAYLPAKELLKPEAEP
RPCERVPRGPPAATASQQAAKLFGLEPGRPPPPAAPEPKWKPFELGNFATTQMAVLAAQH
HHASRAEEEAAAAAKKAYLDPGATLPRAAATCARPGAELHPAAHGPGEASAMQSLIKYSG
SFAREAVAVRPGGCGKKSPFGGLGTMKPEPVPTAAGAPRAQARLPHPGGPTGTGGRQLKR
DPERPESAKAFGREGSGAQGEAEVRHPPVGIAVAVARQKDSGGSGRLGPGLADQERSLSL
SNVKGHGRADEECVDERARHREDRLLGARLDRDQEKLLRESKELADLARLHPSSCAANGL
NPNLMVTGGSALAGSGRWSADPAAHLATHTWLPRSGSTSMWLAGHPYGLGPPSLHQGMAP
AFPPGLGGSLPSAYQFIRDPQSGQLVVIPSDHLPHFAELMERAAVPPLWPALYPPGRSSL
HHAQQLQLFSQQHFLRQQELLYLQQQAAQALELQRSAQLVQERLKAQEHRAEMEEKVSKR
SLEAAGKAGLAASGPGLLPRKPPGLATGPAGTYGKTVSPPPSPRASPVAALKAKVIQKLE
DASKPPGYAYPATPSSHPSSPPPASPPPTPGLTRKEEAPENVVEKKDLELEKEAPSPFQA
LFPDIPPRYPFPALPPHYGRPYPFLLQPTAAADADGLAPDVPLQADGPERLALSPEDKPL
RLSPSKIPEPLREGPDTEPLVEREVKAEVEDMDEGPAELPSLESPLPPEDAMGPSSPVGG
CGGSLLEAQALSASGQGAGEPPGGPDFAEGAEARADSPGRTEACTAAPELVARLPPEPLV
EAKEEPVEVPVAVPMAVAVAEAVPEEGLAQVAQSEPRPGLGLADCDVPAGDGKGLSREAR
EVAPVPSTACFLEEAGPNQFLPGLEDPLAGMNALAAAAELPQARPLPAPGPGARALEQLE
AAQSLVLEQSFLHGITLLSEIAELELEKRSQEVGGAERGLAVRPSLESLLAASSHMLKEV
LDSPFVDPLKNLRLPRELNPNKKYSWMQKKEERMYAMKSSLENMDAMELDFRMRLAEVQR
QYKEKQRELVKLQRRRDSEDRREEPHRSLARRGPGRPRKRTHALSALSPPRKRGKSRNSS
GKLSSKPLLTADDYELGAGMRKRHKGPEEEHDGLVGTGKARGRSQPWDEHEASSDFMSQL
KIKKKKMASDQEQLASKLDKALSLTKQDKLKSPFKFSDSSGGKGKPSGGCGRYLTPYDSL
LGKDRKALAKGLGLSLKASREGKPKRAAKARKMEAGFKARGQPKSAHSPFTSEVSSYSYN
TDSEEEEEFLKDEWPAQGPSSSKLTSSILCGLVAKSSKPAGGPKLSKRGLAAARTLKAKP
AAGRKQPFGLLLPELEARSSFSDSSEDSFDQDESSEEDEEDELEEEEEAGGGYRLGARER
ALSPGLEESGLGLLARFAASALPSPTVGPALSVVQLEAKQKARKKEERQSLMGTEFEYTD
SESEVKVRKRSPAGLLRPKKGPGEPGPSLAAPAPGTRGPGPTSPDKAKLVAEKGRKARKL
RGPKEPGFEAGPEASDDDLWTRRRSERIFLHDAAAPAPSSAAPVVTKPSRCGKGGPLSPR
KDAGRAKDRKDPRKKKKGKEAGSGAALPPPRAPALPPEARGPHASSPAAAKRSKAKAKGK
EVKKENRGKGGAVSKLMESMAAEEDFEPNQDSSFSEDEHLPRGGAVERPLTPAPRSCIID
KDELKDGLRVLIPMDDKLLYAGHVQTVHSPDIYRVVVEGERGNRPHIYCLEQLLQEAIID
VRPASTRFLPQGTRIAAYWSQQYRCLYPGTVVRGLLGLEDDGDLITVEFDDGDTGRIPLS
HIRLLPPDYKIQCAEPSPALLVPSAKRRSRKTSKDTGDSKDGGAPGSEEPGAKARGRGRK
PSAKAKGDRTAVLEEGGSTDEVPSAPLALEPISTPSSKKSPPEPADKRAKAPKARPTPPQ
PSPAPPTFASCPAPEPFGELPAPTATTLAPAPFVAMPITMPATRPKPKKARAAEESATKG
TRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDPGAGGWQEPKTLLGLGGYPPAAGG
SEPKAARPKAGDGDLAQEPGGGLTFEDSGNPKSPDKGQAEQDGAEESESSSSSSSSSSSS
SSSDSGSSSSSSSETEGEEEGRGGGGRNCGASSSRASSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDDSSCSSDDEAAPAPAAGPSAPPALP
SKAPKQTGKARSSAHSPGKKAPAPAPQAPPPQPPQPLQPKAQAGAGAKSRPKKREGVHLP
TTKELAKRQRLPSVENRPKIAAFLPARQLWKWFGKPTQRRGMKGKARKLFYKAIVRGKEM
IRIGDCAVFLSAGRPNLPYIGRIQSMWESWGSNMVVRVKWFYHPEETSPGKRLHEGQHWD
QKSGRSLPAALRASSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKY
QDSEGLYYLAGTYEPTTGMIFSTDGVPVLC
NT seq
8913 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagacttcgggcccccgcggtccgtgcacggccccccgccgccgctgctc
tccggcctggccatggatagccaccgcgtgggcgcggccacggccggacgcctgcccgcc
tcgggcttgcccggcccgctgccgcccgggaagtacatggccggcctcaacctccacccg
cacccgggcgaggccttcttgggcagctttgtggccagcgggatggggccctcggcctcg
tcccatgggagcccggtgcccctgccctctgacctctccttccgctcccccacccccagc
aacctgcccatggtgcagctgtgggccgcccacgcccacgaaggcttctcccacctgccc
agcgggctgtacccgtcctacctccacctgaaccacctggagccccccagcagcgggagc
cccctcctcagccagctgggccagcccagcattttcgagacccagaaagacggcttctac
ctgcccggcccgggggctgcgggcgccctgcactcccacgcgccctcctccaggaccccg
ggcggccactcctccggcacccaggccaaaggctcgtcgcgggaaggtgcagccaaggag
cgcgcgggccgtggcggggagccgcccccgctgttcggcaagaaggacccgcgggcccgc
gaggacgcggccggcccgcgcggtgtggtggacctgacccaggaggcgcgcgccgagggc
cgccaggaccgcgggcccccgcgcctcgccgagcgcctgtcgcccttcctggccgagccg
gggccaccgcgggcgccgggcacaggccccgccgagtccaagggcaagaacctgccgccg
ccgccgccggcgctgagcctctgcaacggggcggccgacgcggggctccccgcgctggtg
gccaaggaggcggcgcgccaggacgagagcgcgcggctgcggcgcgcggaggccctgctg
cccgggccgtgcccgtgcccctcgccgctgccgccaccgccccgccgcccccggcaaggg
cccgcccgcgcccccgccgccccggccgggcccttcgccgcgccgcagcccgcatccgcc
ggcgtctacaccatcttccccacggcggcggcgcgcgagccgggccgcgagcatcgcgtg
gtggcgcccaccttcgtgccttccgtggaggccttcgacgagcgcccggggcccatccag
atcgcgtcgcaggcacgcgatgcccgcgcccgggagcgcgaggtggccaggcccggcgtc
ctgcaggcgccacccgggtccccgcggccacccccggaacggcccgagaagagctcggtg
atccgctcgctcaagcggccgcagcccgccgaggccccgccggcacgggccgcgcgcgcc
tccccggacccccgggcctacctccccgccaaggagctgctcaagcccgaggccgagccg
cggccctgcgagcgtgtcccgcgcggcccccccgccgccaccgcctcccagcaggccgcc
aagctcttcggcctggagcccgggcgaccgcccccgcccgccgcgcctgaacccaagtgg
aaacctttcgagctgggcaacttcgccaccacgcagatggccgtgctggccgcacagcac
caccacgccagccgcgcagaggaggaggccgccgccgccgccaagaaggcctacctggac
cccggggccacgctgccccgcgccgcggccacctgcgccaggccgggcgccgagctgcac
cccgcggcgcacgggcccggagaggcgtcggccatgcagagcctcatcaagtacagcgga
agctttgcgcgcgaggccgtggccgtgcgccctggcggctgcggcaagaagagccccttc
ggaggcctgggcaccatgaaacccgaacccgtccccacggccgcgggcgccccgcgcgct
caggcccgtctcccccaccccggcggccccacggggaccgggggccggcagctgaagcgg
gacccggagaggcccgagagcgccaaggccttcgggcgtgagggctctggagcccagggc
gaagcagaggtgcgacacccgcccgtgggcatcgcagtggccgtggcccggcagaaggac
agtggtggcagtggccggctggggcctgggctggcggaccaggagcgctccttgtcgctg
agcaacgtcaaagggcacggccgggctgacgaggaatgtgtggatgagcgggcccggcac
cgggaggaccggctgctgggggcgcggctggaccgggaccaggagaagctgctcagagaa
agtaaggagctggccgacctggcccgcctgcaccccagcagctgtgctgctaacggctta
aaccccaacctcatggtgaccgggggctctgcgctggcaggctcaggtcgctggtctgcc
gaccctgcggcccacctggccactcacacctggctgccccgctcgggcagcacgtccatg
tggctcgctggacacccctatggcctgggacccccctccctgcaccagggcatggcaccc
gccttcccacccggcctggggggctccctgccctcagcctaccagttcatcagggacccc
cagtcgggccagctggtggtcattcccagcgatcatctgcctcactttgcggagctgatg
gagcgggccgccgtgccgcccctctggcctgccctgtacccgccgggccgcagctccctg
caccacgcccagcagttgcagctcttctcccagcagcacttcctgcggcagcaggagctc
ctgtacctgcagcagcaggcggcccaggccctggagctgcagagaagcgcccagctggtg
caggagcggctgaaggcccaggagcaccgggcggagatggaggagaaggtgagcaagcgg
agcctggaggccgcgggcaaggccggcctggccgcctcgggccccgggctgctgcctcgg
aagccccccggcctggccaccggccccgcgggcacctacggcaagaccgtgagccccccg
ccatctcctcgcgcttcccctgtggctgccctgaaggccaaggtcatccagaagctagag
gacgcgtccaagccacccggctacgcctaccccgccacgcccagctcgcaccccagcagc
ccgccgcccgcctccccgccgcccacccccggcctcacccgcaaggaggaggcacccgag
aacgtggtcgagaagaaggacctggagctggagaaggaggcccccagccctttccaggcc
ctgttcccagacatcccgcccaggtacccgttcccagcgttgccgccgcactacgggagg
ccgtacccgttcctgctgcagcccacggcggccgccgacgccgacggcctggctcccgac
gtgccactgcaggccgatgggcccgagcgcctggcgctctcacccgaagacaagcccctc
cgtctgtcaccctccaagatccccgagccgctgcgggagggcccggacaccgagccgctg
gtggagcgggaggtgaaggcggaggtggaggacatggacgagggccccgccgagctgccc
tccctcgagtccccgctgccgcctgaggatgccatgggcccctcgagccctgtggggggc
tgcggaggcagcctgctggaggcgcaggcgctgagcgccagcgggcagggtgccggggag
cccccgggaggcccggacttcgccgagggggccgaagcgcgggcagactctccgggccgg
acagaagcctgcacagccgccccggagctggtggcacggctgccacccgagccgctggtt
gaggccaaggaggagccggtggaggtgcccgtggctgtgcccatggccgtggctgtggcg
gaggcagtgcccgaagagggcctggcacaggtggcccagagcgagccccggcctggcctg
ggactggcggactgcgacgtgcctgccggggatggcaagggcctgagccgggaagcccgg
gaggtggcccctgttcccagcaccgcctgcttcctggaagaggcgggccccaaccagttc
ctgcccggcctggaggacccactggccggtatgaacgccttggcggcggccgcggagctg
ccccaggccaggcctctgcccgccccgggccctggagcccgggccctggagcagctggag
gcagcgcagagcctcgtcctggagcagagcttcctgcacggcatcaccctcctgagcgag
atcgccgagctggagctggagaagaggagccaggaggtgggaggagctgagcgaggcctg
gcggtgcggccctcgctggagagcctgctggcggccagcagccacatgctgaaggaggtg
ctggacagccccttcgtggacccgcttaagaacctgcggcttccgcgggagctgaacccc
aacaagaagtacagttggatgcagaagaaggaggagcggatgtacgccatgaagtcctcc
ctggaaaacatggacgccatggagctggacttccggatgcggctggcagaggtccagcgg
cagtacaaggagaagcagcgggagctggtgaagctgcagagacggcgcgattccgaggac
aggcgcgaggaaccccatagaagcttggcacgcagaggccctggcaggccgcggaaacgg
acccacgccctgagcgccctgtcgcccccccgcaagagagggaagagccgcaacagtagc
ggaaagctgagcagcaagcccctgctgacagcggatgactacgagctgggagcagggatg
aggaagagacacaaggggcccgaggaggaacatgatggcctcgttgggacggggaaagct
aggggcaggagccagccttgggacgagcatgaagcctcgtcggacttcatgagtcagctc
aagatcaagaagaagaagatggccagcgaccaggagcagctggccagcaagctggacaag
gccctgtccctcaccaagcaggacaagctcaagtcgcccttcaagttctcggacagttcc
ggggggaaggggaagccgagcgggggctgcggcaggtacctgacgccctatgacagcctg
ctgggcaaggacaggaaggcgctggccaagggcctcggcctgtctctcaaggcctccaga
gaaggtaaacccaaaagggccgccaaagcccggaagatggaggccgggttcaaggccaga
ggccagcccaagtcggcccactccccgttcacctcggaagtgagcagctactcctacaat
accgactcagaggaagaggaagaattcctgaaggatgagtggcctgcccaaggcccctcc
agctccaagctgacatcttccatcctgtgtggcctggtggccaagagcagcaagccggcg
gggggccccaagctgagcaagaggggcctggcggccgcccggactctgaaagccaagccg
gctgccggcaggaagcagccgtttggcttgctgcttcccgagctcgaggcccgctcctcc
ttcagcgattcttcggaggactcgtttgaccaagatgagagctccgaggaggacgaggag
gatgagctggaggaggaggaagaggccggtggcggctataggctgggggcccgggagcgg
gccctgtcgccaggcctggaggagagcgggctgggtctgctggcccgctttgcagccagc
gccctccccagccccacggtggggccggccctgtcggtggtgcagctggaggccaagcag
aaggcccggaagaaggaggagcggcagagcctgatgggcacggagttcgagtacaccgac
tcggagagtgaggtcaaggtgcggaagcggtcacctgccggcctgctgcggcccaagaag
ggaccgggggagccgggcccctccctggctgcgcccgcgcccggcacccggggccccggc
cccaccagccccgacaaggccaagctggtggcagagaaggggcgcaaggctcgcaagcta
cgcggccccaaggagcccggcttcgaggcagggcccgaggccagcgacgacgacctgtgg
acgcggaggcgcagcgagcgcatcttcctgcacgacgccgcggccccggcgcccagcagc
gcagcgcccgtggtcaccaagcccagccgctgtggcaagggcggcccgctgagcccgcgc
aaggacgccggccgcgccaaggacaggaaggaccccaggaagaagaagaaggggaaggag
gcggggtccggagctgcgctgcccccgccccgcgcccccgccctgccgcccgaggcccgg
ggccctcacgccagctccccggccgccgccaagaggagcaaggccaaggccaaggggaag
gaggtgaagaaggagaaccgggggaagggaggagctgtgagcaagctgatggagagcatg
gctgccgaggaggacttcgaacccaaccaggactcgagcttctctgaggatgagcacttg
ccacgcggtggggctgtggagcggccgctaactccggctccgcgctcctgcatcatcgac
aaggatgagctgaaagacggcttgcgtgtgctcatccccatggatgacaagctgctgtac
gccgggcacgtgcagacagtgcactcgccagacatctaccgtgtggtggtggagggagaa
cgtgggaaccggccccacatctactgcctggagcagctgctgcaggaggcgatcattgac
gtgaggccagcctccactcgcttcttgccacaagggaccaggatcgcggcctactggagc
cagcagtaccgttgcctctacccgggcaccgtggtccgaggcttgctgggcctcgaggac
gacggggacctgatcactgtggagttcgacgatggagacacagggagaattccgctctca
cacatccgcctcctgcctcccgactataagatccagtgtgctgagccgtccccggccctc
ctggtgccgagcgccaagcgccgcagccggaagaccagcaaagataccggggacagcaaa
gacgggggcgcgccagggtccgaggagcccggcgccaaggcgcgagggcgcgggcggaaa
cccagcgccaaagccaagggtgacagaactgccgtcctggaggaggggggctccacagat
gaggtccctagtgccccgttggccctagagccgatcagtaccccaagttccaagaagagc
cctccagaacccgcagacaagcgggccaaagcccccaaggctcgcccaacaccccctcag
cccagcccggcgccgcccaccttcgccagctgcccggcccccgagccctttggggagctg
ccggcccccaccgccaccaccctggccccggcccccttcgttgccatgcccatcaccatg
cccgccacccgccccaagcccaagaaggcccgggctgctgaggagtcggccaccaagggc
actcggaggcccggggaggaggccgagctgctcgtcaagctggaccatgagggtgtaacg
tcacccaaaagcaagaaggccaaggaagctctgcttctgcgggaggaccccggggctggg
ggctggcaggagcccaagaccctcctgggcctgggcggctaccccccggcagcgggcggc
agcgagcccaaggcggcccggcccaaggccggggacggcgacctggcccaggagcccgga
ggtgggctcacgttcgaggactcggggaaccccaagagcccggacaagggccaggctgag
caggacggggccgaggagtcggagagcagcagcagcagcagcagcagcagcagcagcagc
agcagcagcgacagtggcagcagcagcagcagcagctcggagacagagggagaggaggaa
ggccggggcggcgggggccggaactgcggggcctccagctccagggcctcctcctcgtcc
tcctcttcttcctcgtcctcctcctcgtcctcctcttcttcctcctcctcctcgtcgtcc
tcctcgtcctcatcttcctcctcgtcctcgtcctcttcctcctcctcctcgtcgtcctcc
tcctcttcctcctcctcctcctcctcctcctcctccaccacagacgattcttcctgcagc
tcggacgatgaggcggcccctgcccccgcggccggtccctccgccccgccagccctcccc
agcaaggcccccaagcagactggcaaggcgcgctcctcggcccactccccgggcaagaag
gcgccggcgcccgcgccccaggcccccccgccgcagcccccgcagcctctgcagcccaag
gctcaggccggggccggggccaagagccgccccaaaaagagagagggcgtccacctgccc
accaccaaggagctggccaagcggcagcgcctgccgtcagtggagaaccggcccaagatc
gccgccttcctgcctgcgcgccagctgtggaagtggttcggcaagcccacccagcgccgc
ggcatgaagggcaaggcccgcaagctcttctacaaggccatcgtgcgcggcaaggagatg
atccgaatcggcgactgcgccgtcttcctgtcggccggccgccccaacctgccctacatc
ggccgcatccagagcatgtgggagtcctggggcagcaacatggtggtccgcgtcaagtgg
ttctaccaccccgaggagaccagcccgggcaagcgcctgcacgagggccagcactgggac
cagaagtccggccgcagcctccccgcggccctgcgggcctccagccagaggaaggacttc
atggagcgtgccctgtaccagtcctcccacgtggacgagaatgatgtgcagacggtgtcg
cacaagtgcctggtggtgggcctggagcagtacgagcagatgctcaagaccaagaagtac
caggacagcgagggcctgtactacctcgcgggcacctacgagcccaccacgggcatgatt
ttctccaccgacggcgtgcccgtgctctgctga
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