Equus caballus (horse): 100060952
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Entry
100060952 CDS
T01058
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100060952 (PNN)
03015 mRNA surveillance pathway
100060952 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100060952 (PNN)
03041 Spliceosome [BR:
ecb03041
]
100060952 (PNN)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100060952 (PNN)
Spliceosome [BR:
ecb03041
]
Complex C
Other components
EJC/TREX
100060952 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100060952
NCBI-ProteinID:
XP_023480098
Ensembl:
ENSECAG00000011899
VGNC:
21630
LinkDB
All DBs
Position
1:177116793..177124095
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AA seq
719 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEPGEEEEKEIGIVHSDVEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPVKENASALEMENEPEEKEEKESEPQPEPVAQPQPLP
QPPPPPPSQSQPQPVLQPHPLSQPETLPLAVFQPPPQVIQEQGHLLPERKEFPLESVKLT
EVTVEPVLTVHPESKTKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSS
GSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS
GLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtggacgagaatattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctcgaa
ggggcagtcagtaggctgggcggggagcgtcggactcggagagaatcacgccaagaaagc
gacccagaggacgatgatgttaaaaagccggctttgcagtcttcagttgtagctacctcc
aaagagcgcacacggagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcagaaattcaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaatgagaggagagaactattcgaagaaaggcgt
gctaaacaaacagaactgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataacgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaattaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggagcaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaaccaggagaggaagaggaaaag
gaaataggtatagttcatagcgatgtggagaaagaacaggaggaggaggagcaaaagcag
gaaatggaggttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgtcatt
gctgagcaggaagtcatggaaaccaatcaagtggaaagtgtagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgtgaaagagaatgctagtgctctcgaaatggaaaatgagcctgaggaa
aaagaagagaaagaatctgagccccaacctgagcctgtggctcagcctcagcccctgcct
cagcccccacccccgcccccatctcagtcccagccccagccagtgctccagccccatccg
ctctctcagcctgagactttgcccttagctgtttttcagccaccacctcaggtcattcag
gagcaagggcacttactgcctgagaggaaggagtttcctttagaatctgtaaaactcact
gaggtgacagtagagccagtcttgacggtgcatccagagagcaaaaccaaaaccaaaact
aggagcagaagtagaggtagagctaggaataaaacgagcaagagcaggagtcggagcagt
agcagtagcagttccagtagcagttcaaccagtagcagcagcggcagcagttccagcagc
ggtagcagtagtagtcgaagtagttccagcagcagctccagtacaagtggcagcagcagc
agagacagtagcagcagcactactagcagtagtgagagtagaagtcggagtaggggccgg
ggacataacagagatagaaagcacagaaggagcgtggatcggaagcgaagggatacttca
ggactagaaagaagtcacaaatcttcaaaaggtggtagtagtagagatacgaaaggatca
aaggataagaattcccggtccgacaggaaaaggtctatatccgagagtagtcgatcaggc
aaaagatcgtcgagaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa
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integrated database retrieval system
