Equus caballus (horse): 100061001
Help
Entry
100061001 CDS
T01058
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb04714
Thermogenesis
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100061001 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100061001 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100061001 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100061001 (ARID1B)
03021 Transcription machinery [BR:
ecb03021
]
100061001 (ARID1B)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100061001 (ARID1B)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Helix-turn-helix
ARID
100061001 (ARID1B)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100061001 (ARID1B)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100061001 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100061001
NCBI-ProteinID:
XP_023488920
Ensembl:
ENSECAG00000000518
VGNC:
15499
LinkDB
All DBs
Position
31:complement(10731924..11145147)
Genome browser
AA seq
2351 aa
AA seq
DB search
MAHNASAPAAAASANSAKSSSSEAALKEAGSAAALSSSSSSAAASSSSSAGPGSAMETGL
LPNHKLKTVGEAPAAQHHHHHHAHHHHHHAHHLHHHHHALQQQLNQFQQQQQQQQQQQQQ
QQQQQQHPISNNNSLGGAGGGAAQPGPDMEQPQHGGAKDSAAGSQADPPGQPLLSKPGDE
DDAPPKMGEPAGGRYEHPGLGALGAQQPPVAVPGGGGGGGGGPAAVSEFNNYYGSAAPAS
GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAGAPNSMDPLQNSHEGYPNSQYNHYPGYS
RPSAGGGGGGGGGGGGGSGGGGGGGGGAAAAAGAGAVAAAAAAAAAAAAAGGGGGGGYGG
SSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAAAGGFQRFAGQNQHPSGATPT
LNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPPPSQPQSQAAAAAAGAAAGGQQAAAGMGL
GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGLGSNP
HSQPQQSSPYPGGSYGPPGPQRYPLSIQGRNPGAMGGMQYPQQQMPPQYGQQGVSGYCQQ
GQQPYYNQQPQPPHLPPQAQYLPSQAQQRYQPQQDMSQEGYGTRPQPPLAPGKANHEDLN
LIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN
PAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE
SSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTAPSMSPHPSPGGQMHPGISSFQQS
NSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANNQIHGQGPSQPCGAM
PLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAA
NSAQSRPPYIRSPAYPSQSGAGGRPLFSSQHPNYGTSQAPVLHQPDQYGQGSFPGMNQSG
LMASSSPYSQPMNNSSGLMNAQAPPYSMTPNMVNSSTASMGLADMMSPGDSKLPVPLKAD
GKEEGTAQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGW
PKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPL
DLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIER
GEEPPPEVFSSGETKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAST
PHGQMTPMQGGRSSTVSVHDPFSDASDASFPKRNSMTPSAPYQQGMSMPDVMGRMPYEPN
KDPFGGMRKVPGSSEPFMTQGQMPTSSMQDMYNQSPSGAMSSLGLGQRQQFPYGASYDRR
HEPYGQQYPGQGPPSGQPAYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDVYNMQYGN
QQQEMYNQYGASYSGPDRRPIQGQYPYPYNRERMQGPGQMQPHGIPPQMMGGPMQSSSSE
GPQQSLWATRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQ
RQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLESRMSPSKPPFLPSM
KMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWR
VMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGIL
MEYEVGDPSQKALDHHTAKKDDSQSLADDSGKEDEDAECIDDEEDEEEDEEEDGGKAEAE
DKSSMPVTSPDATADPKEKPRQASKFDRLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLH
WQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGRGDCEEQQEKSIIATID
DVLSARPGALPEDANPGAQMESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTIAHWQ
DSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKE
EDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVC
PSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRY
VGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHN
LMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASV
ICDVLFQIGQL
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggcccataacgcgagcgcgccggccgccgccgccagcgccaacagcgccaagagcagc
agctccgaggcggctctcaaggaggctggaagcgccgccgcgctgtcctcctcctcctcc
tccgcggcggcgtcctcttcctcctcggcgggcccgggctcggccatggagacggggctg
ctccccaaccacaaactgaaaaccgttggcgaagcccccgccgcacagcaccaccaccac
caccatgcccaccaccaccaccaccatgcccaccacctccaccaccaccaccacgcacta
cagcagcagctaaaccagttccagcagcagcagcagcagcagcagcaacagcagcagcag
cagcagcagcagcagcaacatcccatttccaacaacaacagcctcggcggcgcgggcggc
ggcgcggctcagcccggtcccgacatggagcagccgcaacatggaggcgccaaggacagt
gccgcgggcagccaggccgaccccccgggccagcctctgctgagcaagccgggcgacgag
gacgacgcgccgcccaagatgggggaaccggcgggcggccggtacgagcacccgggcctg
ggcgccctgggcgcgcagcagccgccggtcgccgtgcccgggggcggcggcggtggcggc
ggcggcccggcggccgtctcggagtttaataattactatggcagcgctgcccctgctagc
ggcggccccggcggccgcgctgggccttgctttgatcaacatggcggacaacaaagcccc
gggatggggatgatgcactccgcctccgccgccgccggggcccccaacagcatggacccc
ctgcagaactcccacgaagggtaccccaacagccagtacaaccattatccgggctacagc
cggcccagcgcgggcggcggcggcggcggcggcggcggaggaggaggaggcagcggagga
ggaggaggaggaggaggaggagcagcagcagcagcaggagcgggagctgtggcggcggcg
gccgcggcggcggcggcagcagcagcagcaggaggcggcggcggcggcggctatgggggc
tcgtcctcggggtacggggtgctgagctccccccggcagcagggcggcggcatgatgatg
ggccccgggggcggcggggccgcgagcctcagcaaggcggccgccggcgcggcggcggcg
gcggggggcttccagcgcttcgccgggcagaaccagcacccgtcgggggccaccccgacc
ctcaaccagctgctcacctcgcccagccccatgatgaggagctacggcggcagctacccc
gactacagcagccccagcgcgccgccgccgccgccgccgtcgcagccccagtcccaggcg
gcggcggcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatgggcttg
ggcaaggacatgggcgcccagtacgccgctgccagcccggcctgggcggccgcgcaacaa
aggagccacccggcgatgagccccggcacccccggcccgaccatgggcagatcgcagggc
agcccgatggatcccatggtgatgaagagacctcagctgtatgggctgggcagtaacccg
cattctcagccgcagcagagcagcccttacccgggaggttcctacggccccccagggccc
cagcggtacccactcagcatccagggtcggaacccaggggccatgggaggaatgcagtac
ccacagcagcagatgccacctcagtatggacagcaaggtgtgagtggttactgccaacag
ggccagcagccttattacaaccagcagccgcagcctccgcacctccctccgcaggcgcag
tatctgccatcccaggcccagcagaggtaccagccgcagcaggacatgtctcaggaaggc
tatgggactaggcctcaacctcctctggctcccggaaaagctaaccacgaagacttgaac
ttaatacaacaagaaagaccgtcgagtttaccagttgaagtcttgacctcggaggataca
gcctttggactcaaggacctgtctggctccatcgatgacctccccacgggaacggaagcc
actttgagctcagcggtcagtgcatccgggtccacgagcagccaaggggatcagagcaac
ccagctcagtcgcctttctctccacacgcatccccccatctctccagcatccctgggggc
ccctcgccttctcctgtcggctctcctgttggcagcaaccagtcacgatctggcccaatt
tctcctgcaagtattccaggcagtcagatgcctccccagccacccgggagccagtcagaa
tccagctcccatcccgccttgagccagtcaccaatgccacaggaaagaggttttatggca
ggcacacaaagaaaccctcagatgtctcaatatggacctcaacagacagcaccatccatg
tcgcctcatccttctcctggaggccagatgcatcctggaatcagtagctttcagcagagt
aactccagtggaacttacggtccacagatgagccagtatggaccacaaggtaactactcc
agacccccaacgtatagtggggtgcccagtgcaagctacagtggcccagggcccggcatg
ggcatcaatgccaacaaccagatccatggacaagggccaagccagccctgtggtgctatg
cccctgggacgaatgccatcggcggggatgcagaacagaccatttcctggaaatatgagc
agcatgacccccagttctcctggcatgtctcagcagggggggccaggaatggggccacca
atgccaaccgtgaaccgtaaggctcaggaggcagctgctgcagtgatgcaggccgctgca
aactcggcgcagagcaggccaccatacattaggtcgcctgcttatcccagccagtctggg
gctggcggacgccccctgttttcttcccagcaccccaactatggcacctctcaggctccc
gtcctgcaccagcctgaccagtacgggcaaggaagttttcctggcatgaatcagagtgga
cttatggcttccagctctccctacagccagcccatgaacaacagctctgggctcatgaac
gcccaggcgcccccctacagcatgacgcccaatatggtgaacagctcaacagcatctatg
ggtcttgcagatatgatgtctcctggtgactccaagttgcccgtgcctctcaaagcagac
ggtaaagaggaaggcactgcacagcctgagagcaagtcgaaggatagctacagctctcag
ggtatttctcagcccccaacccccggcaacctgccagtcccttccccaatgtcccccagc
tctgctagcatctcctcatttcatggagatgagagtgatagcattagcagcccaggctgg
ccaaagactccatcaagccctaagtccagctcctccaccaccactggggagaagatcaca
aaggtgtatgagctggggaatgagccagagagaaagctgtgggtcgaccgctaccttacc
ttcatggaagagcgaggctcgcctgtctcgagtctgcctgcagtgggcaagaagcccctg
gacctgttccgactctacgtctgcgtcaaagagattggaggtttggcccaggttaataaa
aacaagaagtggcgtgagctggccaccaacctcaatgtgggcacttccagcagcgcggcg
agctccctgaaaaagcagtacatccagtacctgttcgccttcgagtgcaagatcgagcgc
ggggaggagccaccgccggaagtcttcagcagcggcgagaccaagaagcagcccaagctc
cagccgccctctcctgctaactcaggatccttgcaaggtccacagaccccccagtcaact
ggcagtaattcgatggcagaggttccaggtgacctgaagccacctacgccagcctctacc
cctcacggacagatgaccccaatgcaaggtggaagaagcagtacagtcagtgtgcacgac
ccattctccgacgccagcgatgcatcgttccccaaacggaactccatgactccgagcgcc
ccataccagcagggcatgagcatgccagatgtgatgggcaggatgccctatgaacccaac
aaggacccctttggtggaatgagaaaagtgcctggaagtagtgagcccttcatgacgcaa
ggacagatgcccactagcagcatgcaggacatgtataaccaaagtccctctggagccatg
tccagtctgggcctggggcagcggcagcagtttccctatggagccagttacgaccgaagg
catgaaccttacgggcagcagtacccgggccagggccctccctcaggacagccggcatat
ggaggacaccagccgggcctgtatccacagcagccgaattacaagcgccatatggacggc
atgtacgggcctccagccaaacgccacgagggggacgtgtacaacatgcagtacggcaac
cagcagcaggagatgtacaaccagtacggggcctcctactccggcccagacaggaggccc
atccaggggcaatatccgtacccctacaacagagagaggatgcagggcccagggcagatg
cagccgcacgggatcccgccgcagatgatgggcggcccaatgcagtcgtcctccagtgaa
gggcctcagcagagtctgtgggcgacacgcaacgatatgccttatccctaccagaacagg
caaggcccgggtggccctgcacaggcacctccttatccgggcatgaaccgcacggatgat
atgatggtacctgatcaaaggataaatcacgagagccagtggccttctcacgtcagccaa
cgtcagccttatatgtcctcttcagcctccatgcagcccatcacacgcccgcctcagcca
tcctaccagacgccaccatcactgccgaaccacatctccagggcgcccagccccgcctcc
ttccagcgctccctggagagccgcatgtctcccagcaagcctccctttctgccctctatg
aagatgcagaaggtcatgcccactgtgcccacgtcccaggtcacggggccgcccccccag
ccacccccgatcagacgggagattacctttccgcctggctctgtagaagcatcgcagcct
gtcctgaaacaaaggcgaaagattacctcaaaagacatcgttactcctgaggcctggcgt
gtgatgatgtcccttaagtcaggtcttttggctgaaagtacgtgggctttggacactatt
aatattcttctctatgatgacagcactgtcgctactttcaatctctcccagttgtccgga
tttctcgagcttttagtagagtactttagaaaatgcctgattgacatttttggaatcctt
atggaatatgaagtgggagaccccagccaaaaagcacttgatcaccatacagcaaagaaa
gatgatagccagtccttggcggacgattccgggaaagaggacgaagatgctgaatgtatt
gatgacgaggaggacgaggaggaggatgaggaggaagacggtggaaaggcagaggccgag
gataagagcagcatgcctgtgacctctcccgacgccactgcagacccaaaggagaagccc
aggcaagccagtaagttcgacaggctgcccatcaagatagtcaaaaagaacaacctgttt
gtggtcgatcgatctgacaagctggggcgtgtgcaagagttcaacagcggacttctgcac
tggcagctgggtggtggggacaccaccgagcacatccagactcactttgagagcaagatg
gaaatccctcctcgtaggcgtccccctccccctctaagctccgcaggtagaaagaaagag
caggaaggaagaggagattgcgaagagcagcaggagaaaagcatcatcgcgaccatcgat
gatgtcctgtccgctcgaccaggggcgctgcccgaagatgcaaaccctggtgcccagatg
gagagcagtaagtttccctttggtatccatcaagccaaaagtcaccggaacatcaagctg
ctggaggacgagccgaggagccgagacgagactcctctctgcaccattgcgcactggcag
gactctctggctaagcgctgtatctgtgtgtcaaatattgtccgtagcttgtcttttgtg
cctgggaacgacgccgaaatgtccaaacatccaggcttggtgctgatcctggggaagctg
atccttcttcaccacgagcatccagagagaaaacgagcaccacagacctacgagaaagag
gaagatgaggacaaaggggtggcctgcagcaaagatgagtggtggtgggactgcctcgag
gtcttacgggataacacgttggtcacattagccaacatttctgggcagctagacttgtct
gcttacacggaaagcatctgcttgccaattttggatggcttgctgcactggatggtgtgc
ccgtctgcagaggctcaagacccctttccgacggtgggacccaactctgtcctgtcgcct
cagagacttgtgctggagaccctctgtaaactcagtatccaggacaataatgtggacctg
atcttggccacgcccccgtttagtcgtcaggagaaattctatgctacgttagttaggtac
gttggggatcgcaaaaacccggtctgtcgagaaatgtccatggcgcttttatcgaacctt
gcccaaggggacgcgctggcagcaagggcaatagctgtgcagaaggggagcattggaaac
ttgataagcttcctagaggatggggtcaccatggcccagtatcagcagagccagcataac
ctcatgcacatgcagcccccgcctctagaaccacctagcgtggacatgatgtgcagggcg
gccaaggccctcttggctatggccagagtggacgagaaccggtcggaattccttctgcac
gagggccggttgctggatatctccatctcggccgtgctgaactctctggttgcgtctgtc
atctgtgacgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
