Equus caballus (horse): 100061320
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Entry
100061320 CDS
T01058
Symbol
POM121C
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100061320 (POM121C)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100061320 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100061320 (POM121C)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100061320 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
100061320
NCBI-ProteinID:
XP_005615181
Ensembl:
ENSECAG00000000464
UniProt:
A0A9L0RL36
LinkDB
All DBs
Position
13:11256407..11321938
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AA seq
1214 aa
AA seq
DB search
MSPAAAAAGGGDRRRPIASVREAQGRGWGSGGPAGAALLGLSLLGLVLYLVPAAAALAWL
AVGATAAWWGLSREPRGSRAFSSLVRNARRQRTLLVSPPAKSAVNGNLLEPRTLLEGPDP
AELLLMGSYLGKPGPPQPAPAPEARDLRERPGRRPPVRSPPPAPSAHRVRHIHPSLPTPL
LRSPRRPSHRDCGTLSNRFVITPRRRYPIQQPQYSFLGVLPTVCWNGCHKKAVLSPRNSR
MVCSPVTVRIAPPDRKLTRSPRPEQMISSTLSSPSSNAPDPCAKETVLSALKEKKKRTVE
EEEDQIFTDSQENKRRRHDSSGSGHSAFEPLVANGGPASFVPKPGSLKRGLNSQSSDDHS
NKRSRTSSVSSLTSTYTGGIPSSSRNAITSSYSSTRGFSQLWKGSGPSSSPFSSPASSRS
QTPERPAKKIREEELSHHSSSSTPLVIDKESQGEKVADATAWKKQNSWNSPSTPGSSGQR
KRKIQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEKKASLQWFNKVLEDETDTASNSVTE
NPPTTQPSFPFTLPAAGTTSSPTSLPAPSANPLLESLKKMQSSPGLPSFPESAGVATTVA
HLPPKTPSLLASLGSSQSGPLPGTSSDSKSTVTFLGLTPASSTIPVTDTTKSPQAPQAET
SAKSQALSAPSPTPKQSILFGMLSTPPANPSASAAPAVSSASPMFKPIFVAPAISENEGS
LQASPSKVTTTTTSASALPMTTSTPPPTFKPIFSSMGPPTSVPLSTPFSFNQTTTPATTT
SAPLFIGQASAASTVASVTTASTSADSAPKPAFGFGVSNVTSTLSSMTSTTTSTSQSFLF
GTPPASGASFTPAVGSIFQFGKPSAMPTSTTVTTFGQSLPSAVQTAASSSTAGFSGFGNT
LTTSAPVTTSQPTLTFSSTTTPAFNIPFGSSTKPLPAYPGANAQPAFGATDGQQQGTTKP
ALAPSFGSSFTFGNSAAAALTATPAPAPAQPAFGSAGQSAFGGLKPAASAFGAPANTQPA
FGSTTAVFSFGAATTSGFGATTQTTSSGTSSSMFGSTTSSPFTFGGSAAPAGSAGFGINV
ATPGTSSTSGAFSFGGGQSGTTGSTTPFGAGLSQTTLGAPGQSTPFAFNVASTPESKPVF
GGTSTPTFGQNTPAPGVGTSGSSLSFGASSTPTQGFVGVGPFGSAAPSFSIGAGSKTPGA
RQRLQARRQHNRKK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggctgcggcggctggaggaggcgaccggcggcggccgatagcgagtgtc
agggaggcccagggccggggctggggctccggcgggccggctggggcggcgctcctcggg
ctgtcgctgcttggcctcgtgctgtacctggtgccggcggcggccgcgctggcctggctg
gctgtgggggctaccgcggcctggtgggggctgagccgcgagccccgaggttcgcgcgct
ttctcctcgctcgttcggaacgcgcggcgccagcgaacgctgctcgtctcgcctccggcc
aagtcggcagtaaacggaaatctcctagagccgcggacgctgctcgaaggacccgacccc
gctgaactgctccttatgggcagttacctgggcaagcccggccccccgcagcctgccccc
gctccggaggccagggacctgcgagagaggcctggccgccgcccacccgtccgctccccg
ccgcccgctccctcggcgcatcgcgttcgccacattcacccctctctccccactcctctt
ctccgatcccctaggaggccttcccaccgggattgtgggactttatcaaatcggtttgta
ataacacctcgaagacgatatccaatccagcagccccaatattcctttctgggggtgctt
cccaccgtgtgctggaatggttgtcacaagaaggctgtgctctctcctcggaattccagg
atggtgtgcagcccagtgacggtgaggatagctcctcccgaccgcaaactgactcgttct
ccaagaccagagcagatgatcagctcaacactgtcctcaccatcaagtaatgccccagac
ccatgtgcaaaggagactgtactgagtgccctcaaagagaagaagaaaaggacagtggaa
gaggaggaggaccaaatattcactgacagccaggaaaataaaagaaggcgccatgatagc
agtgggagtggacattcagcgtttgagcccctggtggccaatggaggccctgcttccttt
gtgcctaagcctgggtctctgaagagaggtctcaattcccagagctcagatgaccactcg
aataagagatcccgcacctcctctgtgagctccttgacaagcacgtacacgggtggcatc
cctagttccagccgcaatgccattaccagttcttacagctcgactcgaggtttctctcag
ctgtggaagggaagtggtcccagttcatcacccttctcaagcccagcctcatcccgatcc
cagactccagagaggccagcaaagaaaataagagaagaggagctttctcatcattctagt
tcttcaactccattggtaatagacaaggagtcccagggagaaaaggttgcagatgcaact
gcatggaagaaacaaaactcgtggaattccccatctacacctggcagctctgggcaacgt
aaacggaagattcagctgctgccctccaggcgaggggaccagctgaccttgcctccacct
ccccagcttggttattcaattactgctgaagacctagacttggaaaagaaagcttcgtta
caatggtttaacaaggtcttggaggacgagactgacactgcctcaaactctgtcactgag
aacccacccaccactcagccttcttttccttttaccctgcctgctgctgggactacttcc
tccccaacctccctcccagccccaagtgctaacccgctgttggagagcttgaaaaagatg
cagagttccccgggcttaccatccttcccagaatctgctggagtggcaaccactgtggcc
catttgcctccgaagacacccagccttctggcctctcttgggtcttcacagtcagggccc
cttccaggcacctcttcagactccaagtccacggtcactttcttggggctgacccctgct
tcttccacgataccagtcactgacaccaccaagtcacctcaagcccctcaagccgagaca
tctgccaaatcccaagccctgtctgccccatcccccacccccaagcaaagtattctcttt
ggaatgctgagcaccccccctgctaacccttctgcctctgcagctcctgctgtgtcttca
gcatctcccatgttcaagcccatttttgtggccccagctataagtgagaatgagggctcc
ttgcaggctagcccttccaaggttaccaccaccacaacttccgcgtctgccctccccatg
actaccagcacccctcccccgacttttaagcctatctttagcagcatgggtccacctaca
tctgtgcccttatcaactcccttctccttcaatcagacaactactccagccactaccacg
agcgcccctctattcattggccaggccagtgccgcttcaacagtggcttctgtgactaca
gccagcacatccgcagactctgctccaaagcctgcatttggctttggtgtgagcaatgtg
accagcaccctgagtagcatgactagcaccaccacttccacttcacagtctttcctcttc
gggactccccctgcctctggggccagctttaccccagccgtgggctccatattccaattt
ggcaagccttctgccatgcctacttctacgacagtcaccacctttggccagtccctaccc
agtgccgttcagacagccgccagcagcagcactgccggctttagtggttttggtaacacc
cttaccacctcagccccagtcaccaccagccagccgacgctgacattcagtagcactacc
accccagcatttaacattccctttggctcaagcaccaagcctctcccagcatatccagga
gccaatgcccagccagcgtttggggccactgatgggcagcagcaggggactaccaagcca
gctcttgcccccagctttggcagctctttcacttttggaaactctgcagccgcagccctg
actgcaactccagcaccagcccctgcccagccagccttcggcagtgctgggcagtcggct
tttggtggtttgaaacccgcagcctctgcctttggtgcccctgccaacactcagccagcc
tttggcagcaccacggctgttttctcctttggtgcagccaccacctctggctttggagct
acaacccagaccaccagcagcgggaccagtagctcaatgtttggcagcacaacgtcatca
cccttcacatttgggggatcagcagccccagctggcagtgcgggctttgggatcaatgtg
gctaccccaggcaccagttcaacctctggagctttcagctttggaggaggacagagcggg
accactggcagcacaaccccctttggggcaggcttgagtcagaccacgttgggcgcaccc
ggccagagcacaccctttgccttcaatgtggccagcacacctgagagcaaacctgtgttt
ggaggcacctccacacccacctttggtcagaacacccctgcccctggggtgggcacgtcg
ggcagcagcctctcctttggagcatcctcaacacccacccagggctttgttggagtcgga
cctttcggctcggctgccccttcgttttccattggtgccggatccaagaccccaggggct
cggcagcgcctgcaggcccgaaggcagcacaaccgcaagaagtag
DBGET
integrated database retrieval system
