KEGG   Equus caballus (horse): 100061691
Entry
100061691         CDS       T01058                                 
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
  KO
K06252  tenascin
Organism
ecb  Equus caballus (horse)
Pathway
ecb04151  PI3K-Akt signaling pathway
ecb04510  Focal adhesion
ecb04512  ECM-receptor interaction
ecb04518  Integrin signaling
ecb05165  Human papillomavirus infection
ecb05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100061691 (TNR)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100061691 (TNR)
   04518 Integrin signaling
    100061691 (TNR)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100061691 (TNR)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100061691 (TNR)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100061691 (TNR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ecb00536]
    100061691 (TNR)
Glycosaminoglycan binding proteins [BR:ecb00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100061691 (TNR)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_TEN EGF_Teneurin EGF_Tenascin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Fn3_PBP1 Pur_ac_phosph_N EGF_2 Fn3_VIN3 FN3_Tor_3rd DUF7949 SPE9_EGF_3rd Lzipper-MIP1
Other DBs
NCBI-GeneID: 100061691
NCBI-ProteinID: XP_005609748
Ensembl: ENSECAG00000018690
VGNC: 24397
UniProt: A0A3Q2LE99
LinkDB
Position
5:complement(10717908..11122967)
AA seq 1358 aa
MGADGETVVLKNMLIGVNLILLGSLLKPTECQLEVTTERVQRQAVVEEGGGANYNTSGKE
QPVVFNHVYNINVPLDSLCSSRLEASAEQEVSAEDEALAEYTGHTSDHESQVTFTHRINL
PKKACPCASSAQVLQELLSRIEMLEREVSLLRDQCDSNCCQGSAATGQLDYIPHCSGHGN
FSLESCGCICHEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPADCS
SRGLCVDGECVCEEAYTGEDCSELRCPGDCSGKGRCANGTCLCQEGYVGEDCGQRRCPNA
CSGRGDCQEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSLPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVWVSAVRGTNESESTTTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEVQGYKVVYSTLAGEQYHELLVPKSIGPTSRATLTDLVPGT
EYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDMTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYNPRDEEEEMMEVSLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLVHTAMDNPVDLI
ATNITPTEALLQWKAPVGEVENYVIVLTHFAVAGETILVDGGSEEFQLVDLLPSTHYTVT
LYATNGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRADIENYVLTYRSTDG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDATRSSITSTAFTTGGRIFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDSRSLYKLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRLTAGRKRRSLQF
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgggggcagacggggaaacagtagtcctgaagaacatgctcattggtgtcaacctgatc
cttctgggctccttgctcaagccaacagagtgtcagctggaggtcaccacggaaagggtc
cagagacaggcagtggtggaggaaggaggtggtgccaactacaacacatcgggcaaagag
cagcctgtggtcttcaaccacgtgtacaacattaacgtgcccctggacagcctctgctcc
tcgaggctggaggcctcggccgagcaggaggtgagtgccgaagacgaggcgctggcagag
tacacgggccacacctcagaccacgagagccaggtcaccttcacccacaggatcaacctc
cccaaaaaggcctgcccgtgtgccagctccgcccaggtgctgcaggagctgctgagccgg
attgagatgctggagagggaggtgtcgctgctgcgggaccaatgcgacagcaactgttgc
caaggaagtgctgccacaggacaactggactatatccctcactgcagtggccacggcaac
tttagcctcgagtcctgtggctgcatctgccatgaaggctggtttggcaagaactgctca
gagccctactgccccctgggttgctccagtcggggcgtgtgtgtggatggccagtgcatc
tgtgacagcgaatacagtggggatgactgctccgaactccggtgcccggcagactgcagc
tcccgggggctctgtgtggacggggagtgtgtctgtgaagaggcctacacaggcgaggac
tgcagcgagctgaggtgccctggggactgttcggggaaggggagatgtgccaatggtacc
tgcttatgccaggagggctacgtcggtgaggactgtggccagcggagatgtccgaacgcc
tgcagtgggcgaggagactgccaggagggcctgtgcgtctgtgaagagggctaccagggc
cctgactgctcggcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctccactcctcaaggg
ctgcgattcaagacgatcacagagactaccgtggaggtgcagtgggagcccttctcattc
tcctttgatgggtgggagatcagcttcattccaaagaacaatgaaggaggagtgattgcc
cagctccccagtgatgttacatccttcaaccagacaggactaaagcctggggaggaatac
attgtcaacgtggtggctctgaaagagcaagcccggagccttcctacctcggccagcgtc
tctactgtcattgatgggcccacgcagatcctggttcgtgatgtctccgacactgtggcc
ttcgtggagtggacgccccctcgagccaaagttgacttcattctcttgaagtatggcttg
gtgggcggggaaggcgggaagaccaccttccggctgcagcctcccctgagccaatactca
gtgcaggccctgcggcccggctcccggtacgaggtgtgggtcagcgcagtccgcgggacc
aacgagagcgagtccacgaccacccagtttacaacagagatcgacgcccccaagaacctg
cgggttggttcccgcacggcaaccagccttgaccttgaatgggacaacagcgaagcagag
gttcaggggtacaaggttgtgtacagcaccctggcaggcgagcagtaccacgagctgctg
gttcccaagagcatcggcccaacctccagagccaccctcacagatctggtacctggcact
gagtatggagttggaatatctgccgtcatgaactcacagcaaagtgtgccagccaccatg
aacgccaggactgaacttgacagtccccgagacctcatggtgacagcctcttcggagacc
tccatctccctcatctggactaaggccagtggccccattgaccactaccgaattaccttt
actccatcctctggaattgcctcagaagtcactgtgcccaaggacatgacctcgtacaca
ctgacagatctagaacctggggcagagtacatcatttcaatcactgctgagaggggtcgg
cagcagagcttggagtccaccgtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcatgtcacctcctccagtgtgaacatcacctggagtgacccatctccgcca
gcagacagactcattctgaactacaacccccgggatgaagaggaagagatgatggaggtc
tccctggatgccaccaagaggcatgctgttctgatgggcctacaaccagccactgagtac
attgtgaacctggtggcagtacatggcacggtgacctctgaacccatcgtgggctccatc
accacaggaattgatccccccaaagacatcacaatcagcaatgtgaccaaggactcagtt
atggtctcctggagccctcctgttgcatcttttgattactaccgagtatcatatcggcca
acacaagtgggacggctggacagctccgtggtgcccaacactgtgacagaattcaccatc
accaagctgtacccagctaccgaatacgaaatcagcctcaacagtgtgcggggccgggag
gagagtgagcgcatctgcactctcgtgcacacagccatggacaaccctgtggatctgatt
gctaccaatatcactccaacggaagccctgctgcagtggaaggcgccagtgggtgaagtg
gagaactatgtcatcgttctcacccactttgcagttgctggagagaccatcctggttgat
ggaggcagtgaggaattccagcttgttgacctgcttcctagtacccactataccgtcact
ttgtatgccaccaatgggcctctcaccagtggcaccatcagcaccaacttctctaccctc
ctggaccctcctgcaaacctaacagccagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagacattgaaaactacgtcttgacctacagatccaccgatgga
agccgcaaggagctgattgtggatgcagaggacacatggatccgactggagggcctgtca
gagagcacagactacacagtgctcctgcaggcagcccaggacgccacgcggagcagcatc
acctccacagccttcaccacagggggccggatattcccgcatcctcaagactgtgcccag
catttgatgaatggagacactctgagtggggtttacaccatcttcctcaatggagagcta
agccagaagttacaggtttactgtgacatgaccacggacgggggtggctggattgtattc
cagaggcggcagaatggccaaactgattttttccggaaatgggctgagtaccgtgttggc
ttcgggaacctggaggatgagttttggctggggctggacaacatacacaggatcacgtcg
cagggccgctacgagctgcgcgtggacatgcgggatggccaggaggccgccttcgcctac
tacgacaagttctccgtggaggacagcagaagcctgtacaaactccgcataggaggctac
aatggcactgcaggggactccctcagctaccatcaaggacgccctttttccacagaggac
agagacaatgatgttgcagttaccaactgcgccatgtcatacaagggggcttggtggtat
aagaactgccaccggaccaacctcaatgggaaatatggggaatccaggcacagtcagggg
atcaactggtaccattggaaaggccacgagttctccatcccctttgtggaaatgaagatg
cgcccctacaaccaccgtctcacggcggggaggaaacggcggtccttgcagttctga

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