Equus caballus (horse): 100061736
Help
Entry
100061736 CDS
T01058
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb04110
Cell cycle
ecb04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100061736 (SMC1A)
04114 Oocyte meiosis
100061736 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100061736 (SMC1A)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100061736 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
100061736 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
100061736
NCBI-ProteinID:
XP_023489563
Ensembl:
ENSECAG00000019776
UniProt:
A0A5F5PJH7
LinkDB
All DBs
Position
X:44987632..45022179
Genome browser
AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaagtcgtacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
cttatggatgccatcagctttgtgttgggtgagaaaaccagcaacctgcgggtaaagact
ctgagggacctgatccatggagctcctgtgggcaagccagctgccaaccgggcctttgtc
agcatggtctactctgaggagggtgctgaggaccgcacctttgcccgtgtcattgttggg
ggttcctctgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaagaa
ttggagaagttgggcattcttatcaaagctcgtaacttcctcgtcttccagggtgctgtg
gagtctattgccatgaagaaccccaaagaaaggacagcactatttgaagagatcagtcgc
tccggggagctggcccaggagtatgacaagcgaaagaaggagatggtgaaggctgaggag
gacacgcagtttaattaccatcgcaaaaaaaacattgcagctgaacgcaaggaggccaaa
caggagaaagaagaggctgaccgctaccagcgcctgaaggatgaagtggtgcgagctcag
gtacagctgcagctctttaagctttatcataatgaagtggaaatcgagaagctcaataag
gaactggcctctaagaacaaggagattgagaaggacaagaagcgtatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatt
gagaaggagatcaaggagaaggactcagagctgaatcagaagcggcctcagtacatcaaa
gccaaggagaatacctcccacaaaatcaagaagctagaagcagccaagaagtccctacag
aatgctcagaagcattataagaaacgtaaaggagacatggatgagctggaaaaggagatg
ctgtcagtggagaaagcccggcaggagtttgaggaacgaatggaagaagagagtcaaagt
cagggcagagacttgaccctggaggagaatcaggtgaagaaataccaccggttaaaagaa
gaagccagcaagagagcagcaaccctggcccaggagctcgagaagttcaatcgagaccag
aaagccgaccaggaccggctggatctagaagagcggaagaaagtagagacagaggccaag
atcaagcaaaagctgagggagattgaagagaatcaaaagcggattgagaaactggaggag
tacattacgactagcaagcagtccctagaggaacagaagaagctagagggggagctgaca
gaagaggtggagatggccaagcggcgtattgatgagatcaataaggagctgaaccaggtg
atggagcagctgggggatgcccgcattgaccgccaggaaagcagtcgccaacagcgaaag
gcagagattatggagagcatcaagcgcctgtaccctggctctgtgtatggccgcctcatt
gacctctgccagcccacacaaaagaagtatcagattgctgtaaccaaggttttgggcaag
aatatggatgccattattgtggactcagagaaaacgggccgggactgtattcagtatatc
aaggagcagcgtggggagcctgagaccttcttgcctcttgattacctggaggtgaaacct
acagatgagaaactccgggagctgaagggggccaagctggtgattgatgtgattcgctat
gagccacctcacatcaaaaaggccctgcagtatgcttgtggcaatgctcttgtctgtgac
aatgtggaggatgcccgccgcattgcctttggaggccaccagcgccacaagacagtggca
ctggatgggaccctgttccagaagtcaggagttatctctggtggggccagtgacctgaag
gccaaggcccggcgctgggatgagaaagcagtagacaagttgaaagagaagaaggagcgg
ttgacagaggagctgaaagaacagatgaaggcaaaaaggaaagaagcagagcttcgtcag
gtgcagtctcaggcccatggactacagatgcggctcaagtactcacagagtgacctggag
cagaccaagacacgacatctagccctgaatttgcaggaaaagtccaagctggagagtgag
ctagccaactttgggcctcgcatcaatgatatcaagaggatcatccagagccgagagagg
gaaatgaaagacttgaaggagaagatgaaccaggtagaggatgaagtgtttgaagagttt
tgtcgagagattggtgtgcgcaacatccgggagtttgaggaagagaaggtgaagcggcag
aatgaaatagccaagaagcgtttggagtttgaaaatcagaagactcgcttgggtatccag
ttggattttgaaaagaaccaactgaaggaagaccaggataaagtacacatgtgggagcag
acagtgaaaaaggatgaaaatgagatagaaaagctcaagaaggaggagcaaagacacatg
aagatcatagatgagaccatggcccagctacaagacctgaagaatcagcacctggccaag
aagtcagaagtgaatgacaagaatcacgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaggtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgcaagatgcaggacatcaagttg
ccactgtctaagggcaccatggacgatattagtcaggaagagggtagctcccaaggggag
gattcagtgagtggctcccagcgaacttccaatatctatgcacgagaggccctcatcgag
attgactacggtgacctttgtgaggatctgaaggatgcccaggccgaggaggagatcaag
caggagatgaacacactgcagcagaagctaaatgagcagcagagtgtgctccagcgtatt
gctgcccccaatatgaaggccatggaaaagctagaaagtgtccgagacaagttccaggag
acctcagatgagtttgaagcagctcggaagcgagccaagaaggccaagcaggcattcgaa
cagatcaagaaagagcgctttgaccgtttcaatgcttgttttgaatctgtggccaccaac
attgatgagatctacaaggccctgtcccgcaacagcagtgcccaggcattcctgggccct
gagaaccctgaggaaccctacttggatggcatcaactacaactgcgtggctcctggcaaa
cgcttccggcctatggacaacttgtcagggggggagaaaacagtggcagccctggctctg
ctctttgccatccacagctacaagccagcccccttcttcgtcttggatgagatcgatgct
gccttggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcaacttgc
aacttccaggccatcgtcatctctctcaaggaggagttctacacgaaggctgagagcctc
attggagtctaccccgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtacccagatgccaaccccaaccccaatgagcagtag
DBGET
integrated database retrieval system
