Equus caballus (horse): 100061752
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Entry
100061752 CDS
T01058
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
ecb
Equus caballus (horse)
Pathway
ecb05016
Huntington disease
ecb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100061752 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
100061752 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecb03037
]
100061752 (IFT57)
Cilium and associated proteins [BR:
ecb03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
100061752 (IFT57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
DUF745
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
100061752
NCBI-ProteinID:
XP_001503361
Ensembl:
ENSECAG00000011438
VGNC:
18963
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All DBs
Position
19:51407067..51461909
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AA seq
429 aa
AA seq
DB search
MAAAAAVVTPSGLEDGVSRSRGDGAGEVVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEL
LRKNNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKAGRPFEQPQEYDDPNATISNILS
ELRLFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPTYPMEELEEETVPE
DDAELTLNKVDEEFVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGAPLVKIKQSLTKLKQETIQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATV
IPESTIGSY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgcggcggtggtgacgccttcgggtttggaggatggggtgtctcggtcc
cggggcgatggggcgggggaggtggtcgtggaacgggggcccggcgcggcctaccacatg
ttcgtggtgatggaggacctggtggagaagctgaagctgctccgctatgaggaggagctc
ctccggaagaacaacctgaagcccccgtccagacactattttgcactgcctaccaaccct
ggtgaacagttctacatgttttgcactcttgctgcttggctgattaacaaagcagggcgt
ccctttgagcagcctcaagaatatgatgaccctaatgcaacaatatctaacatattatct
gagcttcgattatttgggagaactgcagattttcctccttcaaaattaaaatcaggttat
ggagagcatgtgtgctatgttcttgactgtttagctgaagaagcgttaaaatatattggt
ttcacctggaaaagaccaacatacccaatggaagaattagaagaagaaactgttccagaa
gatgatgcagaattaacgttaaataaagtggatgaagaatttgtggaagaggagacagac
aatgaagaaaactttattgatctcaatgttttgaaggcccagacctatcgcttggatatg
aacgagtctgccaaacaagaagatattttggaatccacaacagatgctgcggaatggagt
ctggaagtggaacgtgtactaccacaactgaaagtcacgattaggactgacaataaggat
tggagaatccatgttgaccagatgcaccaacacaaaagtggaattgaatctgctctaaag
gagaccaagggatttttggacaaactccataatgaaattagtaggaccctggaaaagatt
ggcagccgagaaaagtacatcaacaatcagcttgagcacttggttcaagaatatcgtgca
gcccaagcccagctgagtgaggcaagagagcgataccagcagggaaatggcggcgtgacg
gaaaggaccagactcctgtctgaggttacagaagaactagaaaaggtaaaacaagaaatg
gaagaaaaagggagcagtatgactgacggtgctcctttggtgaagattaaacagagctta
acaaagctgaagcaagaaaccattcagatggacattcgaatcggtgttgtggaacacaca
ttactccagtccaaactgaaggaaaagtccaacatgaccagggacatgcatgccacagtc
attccggaatccacaataggctcctattaa
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