Equus caballus (horse): 100061855
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Entry
100061855 CDS
T01058
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb04115
p53 signaling pathway
ecb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100061855 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100061855 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecb04121
]
100061855 (COP1)
Enzymes [BR:
ecb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100061855 (COP1)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100061855 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100061855 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
zf-C3HC4_2
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
EAD4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100061855
NCBI-ProteinID:
XP_023496361
Ensembl:
ENSECAG00000013304
VGNC:
49339
LinkDB
All DBs
Position
5:complement(11266997..11506326)
Genome browser
AA seq
737 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALGSGGAAQAAGSGG
LGGPARPVLVAAAVSGSGSGGGGGGGAVSAGLSRLSCAARPSAGVGGSSSSLGSGSRKRP
LLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCN
YVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLD
LANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIK
RVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLA
SRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYA
SDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKIS
CISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSD
DAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMV
FKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDY
IACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESN
VLIAANSQGTIKVLELV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagccgccaggccgggtcgggctccgccgggaccagccctggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttatcctcctccccgtcgccgccttccgtg
gcggcctcggcggcggcgctggggtccggcggggcggcgcaggccgcgggctcgggcggc
ctcgggggcccggcgcggcctgtgttggtggcggccgccgtttctggcagcggcagcggc
ggcggcggcggcggcggggcggtgtcggcgggcctgtcccggctcagctgcgcggccagg
cccagcgccggcgtcggagggagcagctccagcctgggcagcggcagcaggaagcgccct
ctgctcgccccgctctgcaacgggctcatcaactcctacgaggacaaaagcaacgacttc
gtctgccctatctgctttgatatgattgaggaagcatacatgacgaaatgtggccacagc
ttttgctacaagtgtattcatcagagtttggaggataataatagatgtcccaagtgtaac
tatgttgtggataatattgaccatctgtatcctaatttcttggtgaatgagctcattctc
aaacagaaacaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagcacc
aatggccataggtggcaaatacttcaggatttgttgggaactgaccaagataaccttgat
ttggccaatgtcaacctcatgttggagttactagtgcagaagaagaaacaactggaagca
gaatcacatgcagcccaactacagatccttatggaattcctcaaggttgcaagaagaaat
aagagagagcagctggaacaaatccagaaggagctaagtgtcttggaagaggatattaaa
agagtggaagaaatgagtggcttatactctcctgtcagtgaggatagcacagtgcctcaa
tttgaagctccttctccatcacacagtagtattattgactctacagaatacagccaacct
ccaggtttcagtggcagttctcagacaaagaaacagccttggtataacagcacattagca
tcaagacgaaaacgactcactgctcattttgaagacttagagcaatgttacttttctaca
aggatgtctcgtatctcagatgacagtcgaactgcaagccagttggatgaatttcaggaa
tgcttgtccaagtttactcgatataattcagtacgacctttggctacattgtcatatgct
agtgatctctataatggttccagcatagtctctagtattgaatttgatcgggattgtgac
tattttgcaattgctggggttacaaagaagattaaagtctatgaatatggcacagtcatt
caagatgcagtggatattcattaccctgaaaatgaaatgacctgcaattccaaaatcagc
tgtatcagttggagtagttaccataagaacctgttagccagcagtgattatgaaggcacc
gtcatcctatgggatggattcacaggacagaggtcaaaggtctatcaggagcatgagaag
aggtgttggagtgttgactttaatttgatggatcctaaactcttggcttcaggttctgat
gatgcaaaagtgaagctgtggtctaccaacttagacaactcagtggcaagcattgaggcg
aaggctaacgtgtgctgtgttaaattcagcccctcttccaggtaccatttggctttcggc
tgtgcagatcactgtgtccactactatgatcttcgtaacactaagcagccaatcatggtg
ttcaaaggacaccgaaaagcagtctcctatgcaaagtttgtgagtggggaggaaatcgtc
tctgcctcaacagacagccaactaaagctgtggaatgtagggaaaccatactgtctacgt
tccttcaagggtcacatcaatgaaaaaaactttgtaggcctcgcttccaatggagattat
atagcttgtggaagcgagaacaactctctttacctgtactataaaggactttctaagact
ttgctaacttttaagtttgatacggtcaaaagtgttctggacaaagaccgaaaagaagat
gatacaaatgaatttgttagtgccgtgtgttggagggcactgccagatggggagtccaat
gtgctgattgctgctaacagtcagggtacaattaaggtgctggagttggtataa
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