Equus caballus (horse): 100061907
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Entry
100061907 CDS
T01058
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100061907 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100061907 (PAN3)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100061907 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
100061907 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
100061907
NCBI-ProteinID:
XP_023477219
Ensembl:
ENSECAG00000014810
LinkDB
All DBs
Position
17:7888973..8023911
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AA seq
921 aa
AA seq
DB search
MNSGGGLPPPSAAASSSSSSLAAAVAVVAPPGVGGVPGGAAAGVKLKYCRYYAKDKTCFY
GEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAAGAGFPPGAVPGGGAGPPPGPKKPDLG
GPGAGVAASGGGSGGVLDGPRLAIPGIDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKY
PLVQRMTNSSSSPSLLNDSAKPYAGHDALTSPASSLFNDFGALNISQRRKPRKYRLGMLE
ERLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGST
SRLSNVSQSNMSAFSQVFSHPSMGSPAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRR
SHTPNPANYMVPSSASTPVSNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMRSFK
NYHRTACRTEGQIIEVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITM
AQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLR
RVHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSR
HFNDPNADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVM
DPTKILITGKTRLRVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNS
LAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQ
MRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQ
VTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIA
AANALLWYFTLDTDTETLFRR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcctcccgcccccctcggccgccgcctcctcttcctcctcctcg
ctggcggcggcggtggcggtggtggccccgccgggggtcgggggtgtccccggcggggcg
gcggcgggagtgaagctgaagtactgccgctactacgctaaggataagacttgcttctac
ggggaggagtgtcagttcctgcatgaggacccggccgccggagctgccccgggcctcggc
ctccatagcaacagcgtccccctggctctggcgggcgctgctggggccggctttcctccc
ggagccgtcccgggcgggggagccgggccgcccccggggcccaagaagccggacctgggg
ggccccggggcgggcgttgcagccagcggaggaggcagcggcggagtactcgatggaccg
cggttggcaattcctggaatagatggaggtgctttaactgatacaagtctcacagattcc
tattttagcaccagctttattggagtcaatggatttggaagccctgtagaaacaaagtat
cccttggtgcagagaatgaccaatagtagcagttccccaagccttctaaatgacagtgcc
aagccgtatgcaggccacgatgctctaacttcacctgcttcatccttgtttaatgacttt
ggtgccctcaacatctctcagagaagaaagccaaggaagtatcgcctggggatgctggag
gagaggctagttccgatgggatcaaaggcgcgaaaagcaaagaaccctattggctgcctt
gctgacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatcctactgcaagcgagtttattcctaaaggaggatcaacc
tccaggctgagtaacgtgtcccagtcaaatatgtctgccttctctcaagttttctctcac
ccatccatgggaagtcctgctgctgctggattagcaccaggaatgtccttgtctgctgga
tcttcccctcttcattcccccaagatcactccacatacttctcctgctcccagaagaaga
agtcacactccaaatccagcaaattacatggtgccttctagtgcctctacacctgttagt
aatcctgtctctcagactccgtcttctggtcaggtgatccaaaaggaaactgtcggtggg
acgacttacttctacacagacacgaccccagcgcctttgactggaatgagatctttcaaa
aattatcacagaacagcttgccgaacagaaggtcaaataattgaggtatttccaaactat
catatttatcctccaactgcacctcacgttgcttatatgcaaccaaaagcaaatgcacct
tccttcttcatggctgatgagctccgacaggagctgattaacagacatttaataacaatg
gctcaaattgatcaagcagatatgccagcagtccctactgaagttgacagctaccatagc
ctgttccctctagaaccactgccaccacccaaccggatacagaaatcaagtaattttgga
tacattacatcttgctacaaagctgttaatagcaaagatgatctgccatactgccttcgg
agggtacatggttttcgtcttgttaacacaaagtgcatggtgttggtcgatatgtggaaa
aaaattcagcactcaaatattgtaaccttgcgtgaagtatttaccactaaagcatttgca
gagccttctcttgtgtttgcatatgatttccatgctggaggagaaactatgatgagcaga
cattttaatgaccctaatgctgatgcctatttcacaaagagaaagtggggtcaacacgat
ggaccattgcccagacagcatgctggattattgccagaatctcttatttgggcatatatt
gtccaactgagttctgcattgcgtaccattcatacagcaggtttggcatgtcgagttatg
gacccaacaaagattctgataactggcaaaacaaggttgagagtaaactgtgttggagtt
tttgatgttttaacgtttgataacagtcagaataataatccattggcattaatggctcaa
tatcagcaagcagatctgatatcattaggaaaagttgtgttggctttggcttgcaactct
ttggcaggaattcagcgagagaatttacagaaagccatggaactggtgacaatcaactac
tcctctgacctgaagaatctgattttgtatttgttgactgaccaaaacaggatgcgaagt
gtaaatgacatcatgcccatgatcggtgctcgattttatactcaattggatgctgctcaa
atgagaaatgatgttatagaagaagaccttgcaaaggaggttcaaaatggaagactgttt
aggcttctagcaaaattgggaacaatcaatgagaggccggagtttcagaaggatcccacc
tggtcggagactggagaccgttatctgttgaaactctttagggatcatctttttcatcag
gtgacagaagcaggtgctccttggattgacctcagtcacatcatttcttgtcttaacaag
ttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgtactt
gtggtgacttatagtgacttgaagcgctgctttgagaatacttttcaagaactgattgca
gctgcaaatgctttattatggtactttacactggatacagacacagagacactgttcaga
agatga
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