Equus caballus (horse): 100062021
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Entry
100062021 CDS
T01058
Symbol
WRN
Name
(RefSeq) Werner syndrome ATP-dependent helicase isoform X2
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecb03032
]
100062021 (WRN)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100062021 (WRN)
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100062021 (WRN)
DNA replication proteins [BR:
ecb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100062021 (WRN)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
100062021 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Laminin_II
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
100062021
NCBI-ProteinID:
XP_014592071
Ensembl:
ENSECAG00000000110
LinkDB
All DBs
Position
27:complement(13356137..13479843)
Genome browser
AA seq
1449 aa
AA seq
DB search
MNEKQLKTSPPKRRLPEWMSMPSKRCAVEERKASSQKSVFEDDLPFLEFTGSIVYSYEAS
DCSFLSEDISLSLSDGDVVGFDMEWPPIYNKRKLDRVALIQLCVSESKCYLFHISSMSVF
PQGLKMLLENKAIKKVGVGIEGDQWKLLRDFDIKLKSFVELTDVANEKLKCAEIWSLNGL
VKHLFGKQLLKDKSVRCSDWNNFPLTEDQKLYAATDAYAGFIIYRKLEILGDAVQMFTIN
REEELLFGDVRKQLTSVSEEMMDLAKRLPDTFRKLENPQRVSVLLKDISENLDSLRKMIF
GSTETELKPSGNSNLLPLGDPTAGGVLQKQIREHKIFTEVKDETWDTTLDNFIKHDGENV
LGNEVKRKDDEFEDELEANKLKEETERIMSLDITEYELQILEQQAQEKNLSDVTYKSPEH
VSSKDNEEDVSYIIESDEDLEMEMLKTLENLNTVTVDPIHSKGTEMEGNLDVPFEDEEDE
SEAVEEEEEDDEDRLLPGPNAEQVICLKTYFGHSSFKPVQWKVIHSVLEERRDNVVVMAT
GYGKSLCFQYPPVYVGGIAIVISPLISLMEDQVLQLEMSNIPACFLGSAQSKNVLEDVKL
GKYRIVYITPEFCSRNLYLLHQLQANIGITLIAVDEAHCISEWGHDFRNSFRNLGSLKTA
FPLVPVVALTATASSSIRDDIVRCLELKNPRITCTGFDRPNLYLEVGQKTGNILQDLKQF
LVQKTCSAWEFEGPTIIYCLSRKMTEQVTAELRKLQLACGTYHAGMGSNSRKEVHHRFMR
DEIQCVVATIAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHLLWTPTD
INLNRNRLSDIPDEKFRLYKLKMMEKMEKYLRSSKCRRQIILSHFEDKQLRKASVGIMGT
ENCCDNCRFRLDHCFFIDDSDDAAQDFGPQALQLLSAVNILGEKFGIGVPILFLQGSNSK
RLADKYRSHSFFGTGKDQTRAWWRALSRQLITEGFLVEVPGKEKFIKICTLTKKGRNWLD
KAKRGSPQRLILEANEELRPRRFLLPSSKTVSSDTGQHSSSQVPTELTAENKANLEKMYS
YKAFDKISSGSNIPKKSVMLESPRKSYKSSEPVISAQEQESQTLLYGELVEARQKRAHNM
DVPPAILATNKILLDMAKMRPTTVENVKRIDGVSEGKATMLAPLLEVIKHFSQTNSIQTD
LFPSTKPQEQQKSPVVKDEARSLSHSVAVTYSLFQEKNMSLKSISENRTLPLTAVGAHLL
QALKAGYPLDMERAGLTPETHKIIADVIRNPPVNSDINKTKLIRMFVPENIDTYLIYMAI
EILRKDCDNRPLCQPSCDSSKKRCFPNSEDSCSRSKRSKDEVGTNTKVDGKHPCDLSPKD
KSHRNSLRLTSWNQPSSDPEIEDLFTDSHPQTSSGALKRMYAGFGKRDKILVDTSKKSMA
RTKKKGLFS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaacagttgaaaacatctccaccgaagcggagacttcctgaatggatgtct
atgcctagtaagagatgtgctgtagaagaaagaaaggcatctagtcagaagagtgttttt
gaagatgaccttcccttcttagaattcactggatccattgtgtacagttatgaagctagt
gattgttctttcctatcagaagatattagcttgagtctgtctgatggagatgtggtggga
tttgacatggaatggccaccaatatataataaacggaaactggacagagttgcactaatt
cagttgtgtgtgtcagagagcaaatgttacttgtttcatatttcttcaatgtcagttttt
cctcagggattaaaaatgttgcttgaaaacaaagcaattaaaaaagtaggtgtaggaatt
gaaggggatcagtggaaacttctacgtgactttgacatcaaattgaagagttttgtggag
ctgacagatgttgcaaatgaaaagctgaaatgtgcagagatctggagcctcaatggtttg
gttaaacacctcttcggtaaacagcttctgaaagacaagtctgtccgctgtagtgattgg
aataattttcctctcactgaggatcagaaactgtatgcagccacggatgcttatgctggt
ttcattatttaccgaaaattagaaattttgggtgatgctgtgcaaatgtttactataaat
agagaggaggaacttctttttggtgacgtgaggaaacagttgacttcagtctccgaggag
atgatggatctggctaagcgtcttcctgacactttcagaaagttggaaaatccacagagg
gtttctgtactgttgaaggatatttcagaaaatctcgattcattgaggaagatgatattt
ggttctaccgagaccgaattgaagcctagcggcaattctaacttactaccattgggagac
ccgactgctggtggagtactacagaaacaaattagagaacataaaatttttactgaagtt
aaagatgagacatgggacacaacactggataatttcattaaacatgatggagaaaatgta
cttggaaatgaagtgaaaagaaaagacgatgaatttgaagatgaactagaagccaataag
ttgaaagaggaaacagaaagaattatgtcattagatatcacagaatatgaactccaaatt
ttggaacagcaggctcaggaaaaaaatcttagtgatgttacttacaaatctcctgagcat
gtatcctccaaggataatgaagaggatgtatcttatataattgaaagtgatgaagattta
gaaatggagatgcttaagactttagaaaacctaaatactgtcacggtagatccaattcat
tcaaaaggcacagaaatggaaggaaatctggatgttccttttgaagatgaggaagatgag
agtgaagctgttgaagaggaagaagaagatgatgaagaccgtttgttaccaggacctaat
gcagagcaagtgatttgcctcaagacctactttggccattccagttttaagccggttcag
tggaaagtgattcattctgtattggaagaaagaagagataacgttgttgtcatggcaact
ggatatggaaagagtttatgcttccagtatccaccagtttatgtaggtgggattgccatt
gtcatctctcctcttatttctttgatggaagaccaagtgctccagcttgaaatgtccaac
attccagcttgttttctgggatcagcacagtcaaaaaatgttctagaggatgttaaatta
ggcaaatatcggattgtatacataactccagaattctgttcgaggaacttgtacctactc
caccaacttcaggctaatattggtatcacacttattgctgtggatgaggctcactgtatt
tctgagtggggacatgattttagaaattcattcaggaatttgggctccctaaaaacagca
ttcccgttggttccagtggtcgccctcactgctacggccagttcttcaatccgggacgac
attgtgcgttgcttagaactgaagaaccctcggatcacctgtactggttttgatcgaccg
aacttgtatttagaagttggacaaaaaacaggaaacatccttcaggatctgaagcaattt
cttgtccaaaagacatgttctgcctgggaatttgaaggtccaactatcatctattgtctt
tccagaaaaatgacagaacaagttacagctgaactcaggaaactgcagttagcctgtgga
acataccatgcaggcatgggtagtaactcaaggaaagaggttcatcatcggttcatgaga
gatgaaattcagtgtgtcgtagctaccatagcttttggaatgggcattaataaagctgat
attcgcaaagtcattcattacggtgctcctaaggaaatggaatcatattaccaggagatt
ggtagagctggccgggatggacttcaaagttcttgtcacctactctggactccaacagac
atcaacttaaataggaaccgccttagtgacatacctgatgaaaagtttcgattatacaaa
ttaaagatgatggaaaagatggaaaaatatcttcgttccagcaagtgtaggcgacaaatc
atcttgtctcattttgaagataaacaactacgaaaggcctccgtgggcattatgggaact
gaaaattgctgtgataattgcaggttcagattggatcattgctttttcattgatgactca
gatgatgcagcccaggacttcggtccgcaagcactccagctattatctgctgtgaacatc
ttaggagaaaagtttggaattggggttccaattttatttctccaaggatccaattccaag
cgtctcgcagataaatatcgcagtcacagtttctttggcactggcaaggaccaaacaagg
gcgtggtggagggctctttcccgtcagctcataactgagggattcttggtcgaagtgcct
gggaaagaaaagtttataaagatttgcacccttacaaaaaagggtagaaattggcttgat
aaagccaaaagaggatcccctcagaggctaatccttgaagctaatgaagagctgcgtcca
aggaggtttcttctaccgagttctaaaactgtatcttcagacactggacagcattcctct
agtcaagtaccaactgaattaactgcagagaataaggctaacttggagaagatgtattct
tataaagcatttgataaaatttcttctgggagtaacattcctaaaaaaagcgtcatgttg
gaatcaccaagaaaatcttacaagtcctcagaacctgttatttcagctcaagagcaagag
tctcagactctgttatacggtgaattggtagaagctaggcagaaacgtgcccataacatg
gacgttcctccagctatcctggcaacaaataagatactgttggatatggccaaaatgaga
cctactacggttgaaaatgtgaaaaggatcgacggtgtttctgaaggcaaagctactatg
ttggcccctctgttggaagtcatcaaacatttcagtcaaacaaatagtattcagacagac
ctctttccaagtacaaagcctcaagaacagcagaaaagtccggtggtgaaagatgaagca
cgctcactttcacactctgtggccgtcacatattctttattccaagaaaagaacatgtct
ttgaaaagcatatctgagaacaggactctgcctctcacagcagttggcgcacacttactc
caagcgctgaaagccggctacccactcgacatggagcgagcaggcctgactccagagact
cacaagattattgctgatgtcatccgaaaccctcccgtcaactcagatatcaataaaact
aaactaattagaatgtttgttcctgaaaacattgacacataccttatctacatggcaatt
gagatcctgagaaaagattgtgacaacagaccgttatgccaaccttcatgtgattccagt
aaaaagagatgtttccccaactctgaggacagctgttcacgttcgaagagaagcaaggac
gaagtaggcactaataccaaggttgatggaaaacatccttgtgatctttcaccaaaagat
aagagtcacagaaattcactgagactgacatcttggaatcagccatccagcgatccagaa
atagaagatttatttacagactctcatccacagacttcatctggagccttaaagagaatg
tatgcggggtttggcaagagagataagatcttagttgataccagcaaaaaatcaatggcc
agaacgaaaaagaagggtctttttagttaa
DBGET
integrated database retrieval system
