Equus caballus (horse): 100062187
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Entry
100062187 CDS
T01058
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X2
KO
K23455
collagen type VIII alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100062187 (COL8A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
100062187
NCBI-ProteinID:
XP_005602133
VGNC:
16749
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Position
19:complement(58269598..58409673)
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AA seq
735 aa
AA seq
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MAVPPAPLPLLGVLLTISLGFIRLIQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQVPH
MPLGKDGLNVGKEYPHLPQYMKEIQPAPRMGKDAAAKKGKEIPVASLRGEQGPRGEPGPR
GPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGPKGEIGP
MGIPGPQGPPGPHGLPGIGKPGGPGLPGPPGAKGERGPKGPPGPPGLQGPKGEKGFGMPG
LPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQGPIGVPGIQGP
PGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGVGGVPG
ALGPRGEKGPVGAPGVGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGVVGPQGPPGPKG
EPGLQGFPGKPGFLGEVGPPGIRGLPGPIGPKGEAGHKGLPGLPGAPGLLGPKGEPGIPG
DQGLQGPPGIPGIAGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGA
LGPQGQPGLPGPPGPPGPPGAPAGMPPTPPPHGEYLPDMGVGIDGVKPPHAYGAKKGKNG
GPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHC
KGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQLPSEQAAGLYAG
QYVHSSFSGYLLYPM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccacctgcccctctgccactgctgggagtgctgcttaccatctccctgggc
ttcatcaggctcattcaggctggtgcctactatgggatcaagccactgccacctcaaatt
cctcctcagatcccaccgcagattccacaataccagcccctaggccagcaagtacctcac
atgcctttgggcaaagacggccttaatgtgggcaaagagtacccacatctaccccaatat
atgaaggaaattcagccggcgcccagaatgggcaaggatgcagcagccaagaagggcaaa
gaaatcccagtagccagtttacgaggggagcaaggtccccgtggagagcctggcccaaga
ggaccgcctgggccccctgggttaccaggtcatgggatacctggaatcaaaggaaaacca
gggccacagggatacccaggagttggaaaaccaggtatgcctggaatgccaggaaagcca
ggagccatgggaatgcccggggcaaaaggcgaaattggacccaaaggagagatcgggcct
atggggatcccaggaccacaaggacctccagggcctcacggacttcctggcattgggaag
ccaggtgggccagggttaccagggccaccaggtgcaaagggtgagcgaggacccaaaggc
ccaccaggacctccaggccttcagggtccaaaaggagagaagggctttgggatgccaggt
ttgccaggcctgaagggccctccagggatgcacggtcctcctggccctgtcggacttcca
ggagtgggcaaaccaggagtgactggcttccctgggccccaggggcccctgggaaagcca
ggtcctccaggcgaacctgggccacaaggtcctattggggtcccagggattcaaggacct
cctgggatacctggaattggaaaaccaggccaggatgggatccctggccagccaggattt
ccaggtggcaaaggggagcaaggactgccagggctgccaggacccccaggccttccaggg
attgggaaaccaggcttcccaggacccaaaggtgacaggggtgtaggtggtgttcctggg
gctctgggcccaagaggggagaaaggaccagtaggtgcccctggagtggggggtccccca
ggagagccaggcctgcctggaatccctggtcctatgggccctccaggtgctattggtttt
cctgggcccaaaggagaaggtggggttgtggggccacagggaccaccaggtcccaagggt
gaaccagggcttcagggcttcccaggaaagccaggcttcctgggtgaagtggggccccct
ggcataaggggtttgccaggtcccatagggcccaagggggaagctgggcacaaaggtttg
ccagggctccctggtgctccagggctgcttggaccaaagggagaaccaggaatcccaggg
gatcagggtctacaggggcccccgggcatcccagggattgcaggccctagtggccccatt
ggaccacctggaattccaggccccaaaggggaaccaggcctcccagggccccctgggttc
cctggaatagggaagccgggggtcgcaggacttcatggccccccaggaaagcctggtgcc
cttggtcctcaaggccagcctggccttccagggccccctggccctccagggcccccaggc
gccccagctgggatgccccctacaccaccaccccatggagagtatctgcccgacatgggg
gtggggattgatggcgtgaagcccccccacgcctatggggctaagaagggcaagaacgga
gggccagcctacgagatgcccgcgtttaccgctgagctgactgcacctttcccccccgtg
ggggccccagtgaagtttgacaaactgctctataacggcagacagaactacaacccgcag
acgggcatcttcacctgtgaggtccctggcgtctactactttgcataccacgttcactgc
aaggggggcaacgtgtgggttgccctgttcaagaacaacgagccggtgatgtacacgtac
gatgagtacaaaaagggctttctggaccaggcgtcggggagcgcggtgctgctgctcagg
ccaggggaccgcgtgttcctccagctgccctcagaacaggctgcagggctgtacgccggg
cagtacgtccactcctccttttcaggatatttattgtatcccatgtaa
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