Equus caballus (horse): 100062249
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Entry
100062249 CDS
T01058
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ecb
Equus caballus (horse)
Pathway
ecb04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100062249 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100062249 (PDS5B)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100062249 (PDS5B)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100062249 (PDS5B)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
100062249 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
100062249
NCBI-ProteinID:
XP_023477254
Ensembl:
ENSECAG00000019312
VGNC:
21282
LinkDB
All DBs
Position
17:11778322..11972341
Genome browser
AA seq
1449 aa
AA seq
DB search
MAHSKARTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELDKPRSRKKTPVTDSEEKLGMDDLTKLVQEQKPKGSQRGRKRGHTASESD
EQQWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTIKTSKKGSKKKSG
PSAAEEEEEEEKQSGNTEQKSKSKQHRMSRRAQQSRAESPETSAVESTQSTPQKGRGRPS
KTPSPSQPKKNVRVGRSKQAATKENDSSEEVDVFQGSSPVNDDIPQEETEEEEVSTVNVR
RRSSKRERR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaaggcgaggaccaatgatggaaaaattacttatcctcctggtgtcaag
gaaatctcagataaaatatctaaagaggagatggtgagacggttaaagatggttgtgaag
actttcatggatatggaccaggactccgaagaagaaaaggagctttatttaaacctggct
ttacatcttgcttcagattttttcctcaagcatcctgataaagatgttcgcttactggta
gcctgctgccttgctgatattttcaggatttacgctcctgaagctccttacacatcccct
gataaactaaaggatatatttatgtttataacaaggcaattgaaggggctagaggataca
aagagcccacaattcaataggtatttttatttacttgagaacattgcttgggtcaagtca
tacaacatatgcttcgagttggaagatagcaatgaaatttttacccaattatacagaaca
ttattttcagttataaacaatggccacaatcaaaaagttcatatgcacatggtagatctc
atgagttctattatttgtgaaggtgatacagtatctcaggagcttttggatacagttttg
gtaaatctagtacctgcccataaaaatttgaacaagcaagcatatgatttggcaaaggct
ttactgaagaggacagctcaagctattgaaccatatatcaccaatttttttaatcaggtt
ctgatgcttgggaaaacatctatcagcgatttgtcagagcacgtctttgacttaattttg
gagctctataatattgatagtcatttgctgctctcagttttaccccagcttgaatttaaa
ttaaagagcaatgataatgaggaacgcctgcaggttgttaaactactggcaaaaatgttt
ggggcaaaggattcagaattggcttctcaaaacaaaccactttggcagtgttacctgggc
aggtttaatgacatccatgtaccaatccgcctggaatgtgtgaaatttgctagccattgt
ctcatgaaccatcctgatttagcaaaggacttaacagagtatcttaaagtgaggtcacat
gaccccgaggaagctattagacatgatgttattgtgtctatagttacagctgctaaaaag
gatattcttctggtcaatgatcacttacttaattttgtgagagagagaacattagacaaa
cggtggagagtgcggaaagaagccatgatgggacttgcccaaatttataagaaatatgct
ttacaatcagcagctggaaaagatgctgcaaaacagatttcatggattaaagacaaatta
ctacatatatattatcaaaatagcattgatgatcgattgcttgttgaacgaatctttgct
caatacatggttccccacaatttggaaactacagaacggatgaagtgcttatattacttg
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctccgacatcaagtaaaggatttgcttgacttaattaagcaacctaaaacagatgcc
agtgtcaaggccatattttcaaaagtgatggttattacaagaaatttgccagatcctggt
aaggctcaggatttcatgaagaaattcacacaggtgttagaagatgatgagaaaataaga
aaacaattagaagtacttgttagtccaacatgctcctgcaaacaggctgaaggttgtgtg
cgtgaaataactaagaagttgggcaaccccaaacagcctacaaatcctttcctggaaatg
atcaagtttctcttggagaggatagcacctgtgcacatagatactgaatctatcagtgct
cttattaagcaggtgaacaaatcaatagatggaacagcggatgatgaagatgagggtgtt
cctactgatcaagctatcagggcaggccttgagctgcttaaggtactctcatttacacat
ccaatctcatttcattctgcggaaacatttgaatctctcctggcttgtctgaaaatggat
gatgaaaaagtagcagaagctgcactccaaattttcaaaaacacaggaagcaaaattgaa
gaggattttccacacatcagatcagctttgcttcctgttttgcatcacaaatctaaaaaa
ggacccccccgtcaagctaaatatgccattcattgtatccatgcgatattttctagtaaa
gagacccagtttgcacagatatttgagcctctgcataagagcctagacccaagcaacctg
gaacatctcataacaccattggttactattggtcatattgctcttcttgcccctgatcaa
tttgctgctcctttgaagtctttggtagctactttcattgtgaaagatcttcttatgaat
gatcggcttccaggaaaaaagacaactaagctttgggttccagatgaagaagtttctcct
gagacaatggtcaaaattcaggcaattaaaatgatggttcgatggctacttggaatgaaa
aataatcacagtaaatcaggaacttctaccttaagattgctaacaacaatattgcatagt
gatggtgacttgacagaacaggggaaaattagtaaaccagatatgtcacgtctgagactt
gctgctgggagtgctattgtgaagctggcccaagaaccctgttaccatgaaatcatcaca
ttagaacagtatcagctatgcgcattagctatcaatgatgaatgctatcaagtaaggcaa
gtgtttgctcagaaacttcataaaggcctttcccgattacggcttccacttgagtatatg
gcaatctgtgcactttgtgcaaaagatcctgtaaaagagagaagagctcatgccaggcag
tgtctggtaaaaaatataaatgtgagacgcgagtatctgaagcagcatgcagctgttagt
gaaaaattattgtctcttctaccagagtatgttgttccatatacaattcatcttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagaatgt
ctttggtttgttctggaaatattaatggctaaaaatgaaaataacagtcatgcatttatc
agaaagatggtagaaaatattaaacaaacaaaagatgcccaaggaccagatgatgcaaaa
atgaatgaaaaattgtacactgtgtgtgatgttgccatgaatatcatcatgtcaaagagt
accacttatagtttggaatctcctaaagacccagtactaccagctcgttttttcacccag
cctgacaagaacttcagtaacaccaaaaattatctgcccccagaaatgaaatcgtttttc
actcctggaaaacctaaaacaaccaatgttctaggagctgttaataagccgctttcatca
gcaggcaaacaatcgcagacaaaatcatcacgaatggaaactgtaagcaatgcaagcagc
agctcaaatcccagctcccctggaagaataaaagggaggcttgatagctctgaaatggat
cacagtgaaaatgaagattacacaatgtcttcacctttgccggggaaaaaaagtgacaag
agagacgactctgatcttgtaaggtctgaattggacaaacctagaagccggaaaaaaaca
cctgtcacagattcagaagagaaattaggtatggatgacctgactaagttggtacaggaa
cagaaacctaagggcagtcagcgtggacggaagagaggccatacggcttccgaatctgat
gaacagcagtggcctgaggaaaagaggctcaaagaagatatattagaaaatgaggatgaa
cagaatagtccaccaaaaaaaggtaaaagaggccgaccaccaaaacctcttggtggaggt
acaccaaaagaagaaccaacaatcaaaacttctaaaaaaggaagcaaaaaaaaatctgga
ccttcagcagcagaagaagaggaagaagaagaaaaacaaagtggaaatactgaacagaag
tcgaaaagcaaacagcaccgaatgtcaaggagagcacaacagagcagagcagaatctcct
gaaactagtgcagttgaatccacacaatccacaccacagaaaggacgaggaagaccatca
aaaacgccatcaccatcacaaccaaaaaaaaatgtccgtgtaggacgctccaaacaagca
gcgactaaagaaaatgattcaagcgaagaagtagatgtgtttcagggtagctctcctgtc
aatgatgatattccacaggaagaaacagaggaagaggaagtttctacagtaaatgtacgg
cggcgaagttctaaaagagaaagacgatga
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