Equus caballus (horse): 100062520
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Entry
100062520 CDS
T01058
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100062520 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100062520 (CSTF2T)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100062520 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
100062520 (CSTF2T)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100062520
NCBI-ProteinID:
XP_001917732
Ensembl:
ENSECAG00000004701
VGNC:
16921
UniProt:
F6S3U2
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Position
1:complement(42646624..42649248)
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AA seq
619 aa
AA seq
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MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGICPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPAPGPIPTGVPGPGPGSLTPGGAMQPQVGMPGVGPVPLERGQVQ
MSDPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHH
ASGHDSRGPSSHEMRGGPLADPRMLIGEPRGPMMDQRGLPLDGRGSRDSRGMETRAMETE
VLETRVMERRGMETCAMEARGMEARGMDARGMEIRGPGPSSRGPMTGGIQGPGPINMGAG
GPQGPRQVPSISGVGNPGAGMQGAGIQGAGMQGAGMQGSGMQGAGMQGAGMQGAGIQGVG
MQGAGIQGTGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPE
QRQSILILKEQIQKSTGAS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccagccatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggccactgaggagcagttaaaggacattttctccgaggttggt
tctgttgtcagtttccggctggtatacgatcgagagacgggaaaacccaaggggtatggc
ttctgcgagtatcaagaccaggagaccgcgcttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgggtggacaatgctgccagtgaaaagaacaaggaggag
ttaaagagcctagggcctgcagcgcccatcattgactccccctacggggaccccatcgat
ccggaagatgccccagaatcaattaccagggcagttgctagtctccccccggagcaaatg
tttgagctgatgaagcagatgaagctgtgtgtccaaaacagtcaccaggaagctcgaaac
atgttacttcaaaacccccaactggcttacgccctgttacaggcgcaagtagtgatgagg
atcatggatccagagattgctttgaaaattctgcatcgcaagatacatgtcacaccgctc
atcccaggcaaatctcagcctgtctctggccctggccctgggatctgcccaggacctaat
gttctactgaaccagcagaatcctccagcccctcagcctcagcatttggctagaagacct
gtgaaagacatccctcctctgatgcagacccctatccagggtggaattccagccccaggg
ccaataccaactggggttcccggacctggtcctggttccttaactcctggtggagcaatg
cagccccaagttggaatgccaggggttggtcctgtgcctttagagcggggacaggtgcag
atgtcggatcctagagctcctatgcctcgtggacccatgactgctggtggcctgcctcct
cgaggactgttaggagatgcaccaaatgacccacgtggagggactttgctctcagtcact
ggagaagtagagcccagaggctatcttggcccacctcatcagggtccccctatgcaccat
gcctctggtcatgacagccgtggcccttcctcacatgagatgaggggagggccattagca
gatcccagaatgctaattggagagcccagaggacccatgatggatcaaaggggtctacct
ttggatggtagaggtagtagagattctcgagggatggagactcgagccatggaaactgag
gtcttagagacacgagtaatggagagaagaggaatggagacctgtgcaatggaagccaga
gggatggaagcaagaggcatggatgcaagaggaatggagataaggggccctggccccagt
tcgagaggccctatgactggtggaatccagggtcctggtcccattaatatgggggcaggt
ggtcctcagggacccagacaggtcccaagcatttcaggggtgggaaatcctggagctggc
atgcagggggcaggcatacaaggagcaggcatgcagggagcgggcatgcagggatcgggc
atgcagggagcaggcatgcagggagcgggcatgcagggagcgggcatacaaggagtgggc
atgcagggggccggcatacaaggaacgggcatgcagggggcgggcaagcaaggtggaggc
cagcctagcagttttagtcctgggcagagccaagtaactccccaggatcaagaaaaggca
gctttgatcatgcaggttcttcaactgactgcagatcagattgccatgctgcctcctgag
caaaggcagagcatcctgattttaaaggaacaaatccagaagtctactggagcttcttga
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integrated database retrieval system
