Equus caballus (horse): 100062560
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Entry
100062560 CDS
T01058
Symbol
ABCA8
Name
(RefSeq) ATP-binding cassette sub-family A member 8 isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
ecb
Equus caballus (horse)
Pathway
ecb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100062560 (ABCA8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecb02000
]
100062560 (ABCA8)
Transporters [BR:
ecb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100062560 (ABCA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
MMR_HSR1
AAA_16
Rad17
AAA_25
AAA_22
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
100062560
NCBI-ProteinID:
XP_005597296
Ensembl:
ENSECAG00000018992
VGNC:
49454
LinkDB
All DBs
Position
11:11866338..11933411
Genome browser
AA seq
1622 aa
AA seq
DB search
MSKREISVCQQTWALLCKNFLKKWRMKREPLLEWLNSFLLLLCLYLYPNNHQLNDFSSLP
TMDLGRVDSFNESKFAIAYTPVTNTTQQIMNKVASASFMKDREVLGLPDEESIKELTANY
PEEIVRVIFTNTFSYHLKFLLGHRIPTKKEHRDHTAHCYETIEDIDCEVSEFWKKGFVAL
QAAINAAIIEITTNHSVMEKLMSVTGKNMKIYPFVSQGGVFTDFFVFFCIISFSPFTYYA
SVNVTRERKRMKRMMTMMGLRDSAFWLSWGLLYASFIFIMAFFLTLVIKSVQFVILTGVM
VVFTLFLLYGLSLIALAFLMSVLIKKSFLTGLVVFLLTVFWGSLGFMALYRNLPASLEWM
LSLFSPFAFTLGMSQLLHLDYDLNSNAFPDPSDLSNLIIATNFMLAVDIFLYLALTMYFD
KILPNEYGHRYSPLFFLKSSFWSRQQKVDHVALEDEIDSDPSSNDSFEPMPPEFHGKEAI
RIRNVTKEYKRKSDKIEALKDLVLDIYEGQITAILGHSGAGKSTLLNILSGLSVPTKGSV
TIYNNRHSEMADLENISKLTGVCPQSNVQFDFLTVRENLRLFAKIKGIQPRELNKEIQRV
LLELEMQNIQNILAQNLSGGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHQVWNLLK
ERKTDRVILFSTQFMDEADILADRKVFLSRGKLKCAGSSLFLKKKWGIGYHLSLQLNEIC
IQENITSLVKQHIPDAKLSAESEGKLVYTLPLERTNKFPELCQHLDSCLGLGIENYGVSM
TTLNEVFLKLEGKSTIDESDIAVLGEVQAERAGDTERLVEMEQVLSSLNELRTTLEGMAL
WRQQICTIARVRLLKLKHERKALLSLLLILGVGFCPLLLEYIVMKIYQNSYTWELSPHLY
FLAPGQQPHAPLSQLLIINKTGASIDDFIHPVEHQNIALEVDTFGTRNGTDDPSYNGAIT
VSGNEKNYSFSLACNTKRLNCFPVLMDIVSNALLGMVNPSAHIQTDRSTFWEDDQVNPLE
FLGHTIFWLVLSSCCAPYIAMSSIDDYKSKAWSQLRISGLFPSAYWFGQALVDVPMYCLF
FLFMYLMDYALNLQETIFKFVNRIIQIPCAVGYATSLIFLTYVISFIFRKGRKNSGIWSF
CFYIITVFSVAGLLLDNYGHVALYSITFLIPQATLIGCVFLSFHLFVLSFFSEEPRGVEP
FLVFLIPFLHFIIFLLILRCLEWKFGKKTMREDPFFRISPRSSKVHQNPEEPEGEDEDVQ
MERERTANALTSTNFDEKPVILASCLRKEYAGKRKRCFSKSKKKIATKNVSFCVRKGEVL
GLLGHNGAGKSTSIKVITGDTKPTAGQVLLKGSSGGDALGFLGYCPQENALWPNLTVKEH
LEVFAAVKGLRRRDAAVAITGLVDALKLQDQLKLPAKALSEGIKRKLCFALSILGNPSVV
LLDEPSTGMDPEGQQQMWQAIRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCI
GSIQHLKSKFGKDYLLEMKVKTPEQGETLHSEILRLFPQAARQERYSSLMVYKLPVEDVR
PLAQAFLKLEMVKQSFHLEDYSLSQSTLEQVFLELSKDQELEDFDEQLPRSVKWKLLMQE
EA
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagagaaataagtgtgtgtcaacaaacctgggccttactatgcaagaacttt
cttaaaaaatggagaatgaaaagggagcccttactggaatggttgaactcattcctccta
ctactttgtttgtacctataccctaataatcatcaacttaatgacttttcttcactgcct
accatggacctgggacgggtagattcatttaacgaatctaaatttgctattgcatacaca
cctgtcaccaacacaacccaacagataatgaataaagtagcttcagcctccttcatgaaa
gacagagaagtcttgggactgcctgatgaagaaagtatcaaagaattaacagcaaattat
cctgaggaaatagtaagagtcatctttactaacacattctcatatcatttgaaattcttg
ctgggacacagaataccaacaaagaaggaacacagggaccatacagctcattgttatgaa
acgattgaagatattgactgtgaagtttcagaattctggaagaaaggtttcgtggctctt
caagctgccattaatgctgctattatagaaatcacaacaaatcactcagtgatggagaaa
ctgatgtcagttactggaaaaaatatgaagatatatcccttcgttagtcaaggaggagtc
tttacggatttctttgttttcttctgcattatttccttttccccgtttacttactatgca
tctgttaatgttacaagagagagaaaaaggatgaagcgcatgatgacaatgatgggtctt
cgagattcagcattctggctctcctggggtttgctctatgctagtttcatcttcatcatg
gcctttttcttgacgctcgttataaaatctgtccagtttgtcatcctgactggcgtcatg
gtggtcttcaccctctttctgctctatggattgtctttgatagctttggcttttctaatg
agcgtcttgataaagaaatctttcctcactggcctggtcgtattccttctcactgtcttt
tgggggagtctgggattcatggcattgtacaggaacctccctgcctccttggagtggatg
ttaagtctttttagtccctttgccttcacgcttggaatgtcccagcttttacacttggac
tatgatttgaattctaatgcatttcctgatccatcagacttatcaaatctaataatagca
acaaatttcatgttggctgttgatattttcctctatctggcattgacgatgtattttgac
aaaattttgccaaatgagtatggacatcgatattcacccctgtttttcctgaagtcctcc
ttttggtcccgacaacaaaaagttgatcatgtggctcttgaagatgaaatcgattctgat
ccttcatctaacgactcttttgaaccaatgcctccagaattccatgggaaagaagccatc
agaataagaaatgttactaaagaatataaaagaaaatctgataaaatagaagctttgaaa
gacctggtacttgacatatatgaaggccaaatcactgccatacttggtcacagtggagct
ggaaagtcaacactgctaaacattcttagtggtttatctgttcccaccaaaggttcagtc
accatctataataatagacattcagaaatggctgacctagaaaatattagcaagctcact
ggagtttgtccacaatccaatgtgcaatttgatttcctcaccgtgagagaaaatctcagg
ctgtttgctaaaataaaggggattcagccacgtgaactgaataaagagatacaaagagtt
ttgctggaattggaaatgcaaaatattcagaacatccttgctcaaaacttaagtggtgga
cagaaaagaaaactaacctttgggattgccattttaggagatcctcagattttcctattg
gatgaaccaactgctggattggatcccttttcaaggcaccaagtttggaacctcctgaag
gagcggaaaacggaccgtgtgatcctcttcagtacccagttcatggatgaggctgacatc
ttggctgataggaaagtgtttctctccagagggaagctgaagtgtgcaggctcttctctg
tttctaaagaagaaatgggggattggataccacttaagcttgcagttgaatgaaatctgc
attcaggaaaatataacatcacttgttaaacagcacatccctgatgccaaattatcagca
gaaagtgaaggaaagcttgtttatacattgcccttagaaagaacaaataaatttccagaa
ctttgtcaacatcttgatagttgtcttggcctgggaattgagaattacggtgtttccatg
acaaccttaaatgaggtgttcctgaaactagaaggaaaatcaactatagatgaatcagat
attgctgttttgggagaagtacaagcagaaagagctggagacacagaaaggcttgttgag
atggaacaagttctctcttcacttaatgagttgagaacgacactcgagggcatggccctc
tggagacagcaaatctgcacaattgcaagggttcgcttgttaaagttaaagcatgaaaga
aaagctcttttatcactgttattgattctaggagtcggattttgccctcttcttttggag
tatatcgtcatgaaaatatatcaaaacagttacacgtgggaactttctcctcatttatac
ttccttgctcctggacaacaaccccatgctcctctctctcaattattaatcatcaataaa
acaggggcaagcattgatgactttatacatcctgtggagcatcagaacatagctttggaa
gtggatacatttggaactagaaatggcacagatgacccatcttataacggagccatcact
gtgtctggtaatgaaaagaattacagcttttcattagcatgcaataccaaaaggctgaat
tgcttcccagttcttatggatattgttagcaatgcgctacttggaatggttaatccgtca
gcacatatccaaactgacagaagtacattttgggaggacgaccaggttaatccacttgaa
ttcctgggacataccattttctggttggttttgtcatcctgttgtgctccttatattgcc
atgagcagcattgatgattataagagcaaagcttggtcccagctacggatttcggggctc
ttcccttctgcttactggtttggacaggcgctggtggatgttccaatgtactgcttgttc
ttcctttttatgtatttaatggactatgccttaaacctccaagagactatatttaaattt
gtaaatcggattatacaaatcccgtgtgctgttggttatgccacgtctcttatcttcttg
acatatgtgatttcattcattttccgcaaggggagaaaaaatagtggcatttggtctttt
tgcttctatattatcaccgtcttctctgtggctggattactgttggataactatggacat
gttgcactgtatagcatcacctttttaataccacaagccacattaatcggctgtgtgttc
ttatcttttcatctttttgtgctttctttctttagtgaagaaccaagaggtgtagagccc
tttctggtattcctaattcctttccttcattttatcatctttcttctcattcttcgatgc
ctggaatggaagtttggaaagaaaacaatgagagaggatcccttctttagaatttctcca
agaagtagcaaagtgcatcaaaatccagaagagccagaaggggaggatgaagatgttcag
atggaaagagagagaacagcaaatgctttgacttccacaaactttgacgagaaaccagtc
attcttgccagctgtctacgtaaggagtatgcagggaagaggaaacgctgcttttccaag
agcaagaagaaaatagccacaaaaaatgtctctttctgtgttagaaaaggtgaggtttta
ggattattaggacacaatggagctggtaaaagtacgtccattaaagtgataactggagac
acaaaaccaaccgccggacaggtgctactgaaagggagcagcggaggggacgccctcggg
ttcctggggtactgtcctcaggagaacgcgctgtggcccaacctgacggtgaaggagcat
ctggaggtgttcgccgccgtgaaaggcctgaggagacgggacgccgcagtcgccatcaca
gggttggtggacgcgctcaagctgcaggaccagctgaagcttccggcgaaggccctatcg
gagggaataaagaggaagctgtgctttgcgctgagcatcctgggaaacccctcggtggtg
cttctggacgagccgtccacggggatggaccccgaggggcagcagcaaatgtggcaggcg
atccgggccacctttagaaacacggagaggggtgccctcttgaccacccattacatggca
gaggctgaggccgtgtgtgaccgcgtggccatcatggtgtctggaaggctgagatgtatc
ggttccatccaacacctgaaaagcaaatttggcaaggattacctactggagatgaaggtg
aagacccccgagcaaggggagaccctccatagcgaaattctgaggctcttcccccaggcg
gctcggcaggaaaggtactcgtctctgatggtctataagttgccagtggaagacgtacga
cctttggcccaagcttttctcaaattagagatggttaaacagagcttccacctggaggac
tacagcctctcgcagtccactctggagcaggttttcctggagctgtccaaggaccaggag
ctggaggactttgatgagcaacttccccgctcagtgaagtggaagctcctcatgcaggaa
gaggcttaa
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integrated database retrieval system
