Equus caballus (horse): 100062567
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Entry
100062567 CDS
T01058
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100062567 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100062567 (EXOSC8)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100062567 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100062567
NCBI-ProteinID:
XP_001495596
Ensembl:
ENSECAG00000012606
VGNC:
17737
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All DBs
Position
17:15744897..15752031
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GIKAEFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTISEETALAEVN
LKKKSFLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVVKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggttcaaaactgtggaacctttggagtattacaggagatttttgaaagag
aactgccgtcctgatggaagagaacttggtgaattcagaactactactgtcaacataggt
tcaattagtactgcagatggttctgctttagtgaagctgggaaatactacagtaatttgt
ggaattaaagcggaatttgcagcaccaccaacagatgcccctgataaaggatatgttgtt
cctaatgtggatctaccacctctgtgttcgtcgagatttcggtctggacctcctggagaa
gaggcccaagtggctagccagttcattgcagatgtcattgaaaattcacagataattcag
aaagaggacttatgcatttctccaggaaagcttgcttgggttctatactgtgatcttatt
tgcctggactatgatggaaacattttggatgcctgtacctttgctttgttagcagcctta
aagaatgtacagttgcctgaagttactataagtgaagaaaccgctttagcagaagttaat
ttaaagaaaaaaagttttttgaatattagaactcatccagttgcaacctcctttgctgtg
tttgatgacactctgctgatagttgaccctactggagaggaggaacatctggcaaccgga
accttaacagtagtaatggatgaggaaggcaagctatgttgtcttcacaaaccaggtgga
agtgggctgactggagctaaacttcaggactgtatgagccgagcagttacaagacacaaa
gaagtaaaaaaactgatggatgaagtagttaagagtatgaaacccaaataa
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