Equus caballus (horse): 100062586
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Entry
100062586 CDS
T01058
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecb03009
]
100062586 (DCAF13)
04121 Ubiquitin system [BR:
ecb04121
]
100062586 (DCAF13)
Ribosome biogenesis [BR:
ecb03009
]
Eukaryotic type
90S particles
Other 90S particles
100062586 (DCAF13)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100062586 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
NBCH_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
100062586
NCBI-ProteinID:
NP_001296208
Ensembl:
ENSECAG00000009654
VGNC:
17028
UniProt:
F6ZBF2
LinkDB
All DBs
Position
9:50448031..50479221
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYMRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRALQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGFGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDI
WDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKGRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAAKDYNQKLKEKFQHHPHIKRIARHRHLPKSIYSQIQEQRIMREARRRKEVN
RLKHSKPGSVPIVSEKKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaaagatgctgagccggaacccggacaactatgtccgcgaaaccaagctggat
ttacagagagttccaagaaactatgatcctaccttacatccttttgaggtcccacgagaa
tacatgagagctttaaatgctaccaaactggaacgagtatttgcaaagccattccttgct
tccctggatggtcaccgagatggagtcaattgcttggcaaagcatccaaagagcctggct
actgtcctttctggggcatgtgatggagaggttagaatttggaacttgactaaacgaaaa
tgtatccgtgcactacaagcccatgaaggttttgtacgaggaatatgcactcgcttttgt
gggacttctttttttactgtcggtgatgacaaaactgtgaagcagtggaaaatggatgga
ccaggctttggagaagaagaagaaccattgcatacaatattaggaaagacagtgtacaca
ggaattgatcatcactggaaagaagctgtttttgccacatgtggacagcaagtagacatt
tgggatgaacaaagaaccaatcctatatgttcaatgacctggggatttgacagtataagt
agtgttaaatttaacccaattgagacatttctcttgggaagttgtgcttctgacaggaat
atagttctgtatgatatgaggcaagctactcctctgaaaaaggtcatcttagatatgaga
acaaatacaatttgttggaaccctatggaagctttcatttttactgcagcaaatgaagat
tacaacttgtatacttttgatatgcgtgcactggacactcctgtaatggtacatatggat
catgtgtctgccgtgcttgatgtggattactctcccaccgggaaagagtttgtgtctgct
agttttgataaatctattcgcatctttcctgtggacaaaggtagaagcagggaagtctat
cacacaaagagaatgcaacatgttatctgtgtaaaatggacctctgacagcaagtacata
atgtgtggctctgatgaaatgaacattcgtctgtggaaagctaacgcttctgaaaaactg
ggtgtgcttacatcacgagaaaaagcagccaaagattataaccagaagttgaaggagaaa
tttcagcatcatcctcatataaaacgtatcgctcggcaccgacatctccctaagtctatc
tatagccagattcaggagcagcgcatcatgagagaagctcgtcggcggaaggaagtgaat
cgtctcaaacatagcaagcctggatctgtgccaattgtgtcagagaagaagaaacacata
gtggcagttgtgaaataa
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