Equus caballus (horse): 100062641
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Entry
100062641 CDS
T01058
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ecb
Equus caballus (horse)
Pathway
ecb04360
Axon guidance
ecb04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100062641 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
100062641 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100062641 (TRPC4)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100062641 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100062641
NCBI-ProteinID:
XP_014587498
Ensembl:
ENSECAG00000024910
VGNC:
24551
UniProt:
A0A3Q2HI07
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All DBs
Position
17:complement(16346096..16556859)
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AA seq
977 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLCTVQSAHAATESSNSADSDEK
SDNEGSSRDKKKNFSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRKVNFVT
DIKNFGLFHRRSKHNAAEQNANQIFSVSEEMARRQAEGPLERNIQLESRGLASRSDLNIP
GLSEQCILVNHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKRGKEEDCSVDYD
VNLTDTVTHEDYVTTRL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgttaatgccccctacagagatcgcatccctcta
aggatagttcgagcagaatcggaactctcaccgtcagaaaaagcctacttaaatgctgtg
gaaaagggagattatgcaagcgtcaagaaatccctagaggaagctgaaatttattttaaa
atcaatattaattgcattgatcctcttggaagaactgctctcctcattgcaattgaaaat
gagaacttggagctcattgaactgctcttaagctttaatgtctatgtcggagatgctcta
ttacatgctataaggaaagaagtcgtcggcgctgttgagctgttactgaaccacaaaaag
cccagtggagaaaaacaggtgcctcccattctccttgataagcagttctctgaattcact
ccggacattacaccaatcattttggcagcccatacaaataattatgagataataaaactt
ttagttcaaaaaggagtctcggtacccagaccccatgaggtccgctgtaactgtgttgaa
tgcgtctccagctcagatgtggatagcctccgccactcacgctccagactcaacatctac
aaggccttggccagtccctctctcatcgcactgtcaagtgaagatccttttctcacagcc
tttcagttaagttgggagcttcaggaactgagtaaggtggaaaatgaattcaagtcagag
tatgaggagctgtcacgacagtgcaaacaatttgctaaggacctactggatcagacaaga
agttccagagaactggaaatcattcttaattaccgagatgacaatagtctcatagaagaa
caaagtggaaatgatctcgcaagactaaaattggccattaagtaccgtcaaaaagagttt
gttgcccagcccaattgccaacagctgcttgcatctcggtggtacgatgagttcccaggc
tggaggagaagacattgggcagtgaagatggtgacatgtttcataataggacttcttttt
cctgtcttctctgtgtgctaccttatagctcctaaaagcccacttggactgttcatcaga
aagccatttatcaagttcatctgccatacagcatcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggcggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaactccctatacttagcaacaatctccttgaaaatcgttgcatttgtaaagtacagt
gctcttaatccaagagaatcttgggacatgtggcaccccactttggtggctgaagcttta
tttgccattgcaaacatcttcagttctctgcgcctgatctcactatttaccgcaaattct
cacctggggcctctgcaaatatccctgggaagaatgctcctggacattttgaagtttcta
ttcatatactgcctcgtgttgctagcatttgcaaatggcctgaatcaactatacttctat
tatgaagaaacgaaagggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgagacactccagtccctattttggtcaatatttgggctcatcaat
ttatatgtgaccaatgtcaaagcacagcatgaattcactgagtttgttggtgccaccatg
tttgggacgtacaatgtcatctctctggttgtcctactcaacatgttaatagctatgatg
aataattcttaccaacttattgctgaccatgcagatatagaatggaaatttgctcgaaca
aagctttggatgagttactttgaagaaggaggtaccctgcctactcccttcaatgtcatc
ccgagccccaagtctctgtggtacctgatcaagtggatatggacacatctgtgcaagaaa
aagatgagaagaaaaccagaaagttttggaacaattgggagacgagctgctgataattta
agaagacatcaccaatatcaagaagttatgaggaatctggtgaagcggtacgtggctgcc
atgatcagagatgccaagactgaagaaggtctgacggaagagaactttaaggaactaaag
caagacatttctagtttccgcttcgaagtcctggggttactaagaggaagtaaactatgt
acggtgcaatccgctcacgccgcgacggagtcttccaactcagctgactccgatgaaaag
agcgataacgaaggaagcagcagggacaagaaaaagaacttcagccttttcgatttaacc
accctgattcatccgagatcggcagcaattgcctctgaaagacacaacataagcaatggc
tccgccctggtggtgcaggagccccctagggagaagcagagaaaagtgaatttcgtgact
gatatcaaaaactttgggttatttcacagacgatcaaaacacaacgctgctgagcaaaat
gcaaaccaaatcttctctgtttcagaagagatggctcgtcgacaggctgaaggaccactg
gagagaaatattcaactggaatcccgaggcttagcttcacggagtgacttgaacatcccc
ggcctcagtgaacaatgtatattagtaaaccatcgagaaaggaacacagacaccctcggt
ttacaggtaggcaagagagtgtgtccgttcaagtcagagaaagtggtcgtggaagacact
gtcccaataataccaaaggagaagcgcgggaaggaagaggactgtagcgtagactatgac
gtaaacctcactgacacagtcacccacgaggactatgtgacaacaagattgtga
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