Equus caballus (horse): 100062897
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Entry
100062897 CDS
T01058
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100062897 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100062897 (SMARCA5)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100062897 (SMARCA5)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
100062897 (SMARCA5)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
100062897 (SMARCA5)
RSF complex
100062897 (SMARCA5)
WICH complex
100062897 (SMARCA5)
B-WICH complex
100062897 (SMARCA5)
NORC complex
100062897 (SMARCA5)
BRF complex
100062897 (SMARCA5)
NuRF complex (fruit fly)
100062897 (SMARCA5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
100062897
NCBI-ProteinID:
XP_001502076
Ensembl:
ENSECAG00000002676
VGNC:
23320
LinkDB
All DBs
Position
2:complement(88666672..88707084)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKPAASAASGGSNSSNKGGPEGVAAQAASFAAGAGPADSEMEE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagcctccaccacccccgcctcccgagagcgcgccttccaagccc
gcagcctcggccgccagcggcgggagcaacagcagcaacaaaggcggccccgagggcgtc
gcggcccaggcggcctcctttgcggccggcgccggccccgcggactccgagatggaggaa
gtctttgatgatgcgtctcctggaaagcaaaaagaaatccaagaaccagatcctacttat
gaagaaaaaatgcaaactgatcgagcaaataggtttgagtatttattaaagcagacagag
ctgtttgcacatttcattcagcctgctgctcagaagactccaacctcacctttgaaaatg
aaaccagggcgcccacgaataaaaaaggatgaaaaacagaacttgctgtcagttggcgac
taccggcaccgtagaacagaacaagaggaggatgaagaactattaacagaaagctccaaa
gcaaccaatgtttgcactcgatttgaagactctccatcatatgtaaaatggggtaaactg
agagattatcaggtccgaggattaaattggcttatttctttgtatgagaatggcatcaat
ggtatccttgcagatgaaatgggcctgggaaagactcttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtccccatatggttttggttcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgtttg
ataggagataaagaacaaagagctgcttttgtcagagatgttttgttaccaggagagtgg
gatgtttgtgtaacatcttatgaaatgcttattaaagagaagtctgttttcaaaaaattt
aattggaggtacttagtcatagatgaagctcacaggatcaaaaacgaaaaatccaagtta
tcagaaatagtgagggaattcaagactacaaatcgactattgttaactggaacacctctt
caaaacaacttgcatgagctctggtcacttcttaattttttgttgccagatgtctttaat
tcagctgatgactttgattcctggtttgatacaaataattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaagctgatgtt
gaaaagagtttgcctccaaagaaggaagtaaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcggatattaatgaaggatatagatatactaaactctgcagggaag
atggacaaaatgaggttgttgaacatcctgatgcagttgaggaaatgctgtaatcatcca
tatctatttgatggagctgaacctggtccaccttatacaacagatatgcatctagttacc
aacagtggcaaaatggtggtgttagacaagctgctccctaaattaaaagagcaaggttca
cgagtactaatcttcagtcagatgacaagggtattggacattttggaagattattgcatg
tggagaaattatgagtactgcagattggatggacagacaccccatgatgagagacaggag
tccatcaatgcatacaatgaaccaaacagcacaaagtttgttttcatgttaagcacacgt
gctggtggtcttggcatcaatcttgctactgctgatgtagtaattttgtatgattcagat
tggaatccccaagtagatctccaggctatggaccgagcacataggattggacaaaccaag
actgtcagagtgttccgctttataactgataacactgtagaagaaagaatagtggaacgt
gctgagatgaaactcagattggattcaatagtcattcaacaaggaagacttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcagatgattagacatggggcaacacat
gtctttgcttcaaaggaaagtgagattactgatgaggatatcgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagaatcgagtgtttataactttgaaggagaagattataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagct
aactatgctgtggatgcctatttcagggaagctcttcgtgttagtgaacctaaagcaccc
aaggctcctcgacctccaaaacaacccaacgttcaggatttccagttctttcctccacgc
ttatttgaattattggaaaaagaaattctatattacagaaaaactattggatacaaggta
cctcgaaatcctgacctaccaaatgcagcacaggcgcaaaaagaagaacagcttaaaatt
gatgaagctgaaccccttaatgatgaagagttagaggaaaaagagaagcttctaacacag
ggatttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaacatagcaagagaagtagaaggaaagacgccagaagaggtc
attgagtactcagctgtgttctgggaaagatgcaatgagctccaggacatagagaagata
atggctcagattgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcatatggt
actaacaaaggaaaaaactatactgaagaagaggatcgttttctaatctgtatgcttcat
aagcttgggttcgacaaagaaaatgtttatgatgaattgcgacagtgtattcgaaactct
cctcagttcagatttgactggtttcttaagtccagaactgcaatggagctccagaggagg
tgtaacaccttaattaccttgatcgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaaaagaggaccaaagccttcaacacagaaacgtaaaatggatggagca
cctgacggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
