Equus caballus (horse): 100062938
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Entry
100062938 CDS
T01058
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100062938 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100062938 (CNOT2)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100062938 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100062938 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
100062938
NCBI-ProteinID:
XP_005613929
VGNC:
16676
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All DBs
Position
6:86110679..86222196
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AA seq
536 aa
AA seq
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MCHFCVETHETKVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSVFPHRSEKDMLASPST
SGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTP
PSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPSRSSPSIICMPKQQPSRQ
PFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGN
PTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKSNLNT
SGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFI
RAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTN
IHIRDKLAAIKLARYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPG
MEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSAFNYNPAQQAF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatttctgcgttgaaacgcacgaaacaaaggtgacaaacagcatgtttggtgct
tcaagaaagaagtttgtagagggagtcgacagtgactaccatgacgaaaacatgtactac
agccagtcgtctgtgtttccacatcggtcagagaaagacatgctggcatcaccatctaca
tcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagtgcactaggcctt
ccaatgagggggatgagcaacaatacccctcagttaaatcgcagcttatcacaaggcact
cagttaccgagccacgtcacgccaacaacaggggtaccaacaatgtcacttcacacgcct
ccatctccaagcaggggtattttgcctatgaatcctaggaatatgatgaaccactcccag
gttggtcagggcattggaattcctagcaggacaaatagcatgagcagttcagggttaggt
agccccagcagaagctcgccaagcataatatgtatgccaaagcagcagccttctcgacag
ccttttactgtgaacagtatgtctggatttggaatgaacaggaatcaggcatttggaatg
aataactccttatcaagtaacatttttaatggaacagatggaagcgaaaatgtgacagga
ttggacctctcagattttccagcattagcagaccgaaacagaagggaaggcagtggtaac
ccaactccattaataaaccccttggctggaagagctccttacgttggaatggtaacaaaa
ccagcaaatgagcaatcccaggacttctcaatacacaacgaagattttccagcattacct
ggttccagctataaagatccaacatcaagtaatgatgacagtaaatcaaatttgaataca
tctggcaagacaacttcaagtacagatggacccaaattccctggagataaaagttcaaca
acacaaaataataaccagcagaaaaaagggatccaggtgttacctgatggtcgggttact
aatattcctcagggaatggtgacggaccagtttgggatgattggcctcttaacgtttatc
agggcagcagagacagacccgggaatggtacatcttgcgttaggaagtgacttaacaaca
ttaggcctcaatctgaactctcctgaaaatctctaccctaaatttgcatcaccctgggcg
tcttcaccttgtcgacctcaagacatagacttccatgttccatctgagtacttaacgaac
attcacattagggataagctggctgcaataaaacttgcccgatacggagaagaccttctc
ttctatctctattacatgaatggaggagacgtattacaacttttagctgcagtagagctt
tttaaccgtgattggagataccacaaagaagaacgagtatggattaccagggcaccaggc
atggagccaacaatgaaaaccaatacatatgagaggggaacatattacttctttgactgt
cttaactggaggaaagtagctaaggagttccatctggaatacgacaaactggaagagcgg
cctcacctgccatccgccttcaactacaaccctgctcagcaggccttctga
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