Equus caballus (horse): 100063419
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Entry
100063419 CDS
T01058
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41 isoform X1
KO
K11600
exosome complex component RRP41
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100063419 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100063419 (EXOSC4)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100063419 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
100063419 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100063419
NCBI-ProteinID:
XP_001917049
VGNC:
17734
UniProt:
F6ZU96
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Position
9:84857313..84859256
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDARLHEDHLEQVLEAAARAARDVHTLLDRVVRQHVHEAS
ILLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggagctcctgtcggaccaaggctaccgcgtggacgggcggcgcgccggg
gagctgcgcaagatccaggcgcgaatgggcgtgttcgcgcaggccgacggctcggcctac
atcgagcagggcaacaccaaggcgctagcagtggtctacgggccgcacgagatccggggc
tcacgggcacgagccctgccagacagggcactggtgaactgtcagtacagttctgccacc
ttcagcacaggtgagcgcaagcggcggccacatggggaccggaagtcctgcgagatgggc
ctacagctgcgtcagaccttcgaggcagccatccttacacagctgcatccacgctcccag
attgatatttacgtgcaggtgctgcaggcagatggtgggacctacgcggcttgtgtgaat
gcagccacgctggcagttatggacgctgggatccccatgcgggactttgtgtgtgcctgc
tcagctggctttgtggacggcacagccctggcagacctcagccacgtggaggaagcagct
ggtggcccccagctggccctggccctgctgccggcctcaggccagattgcactgcttgag
atggacgccaggctgcatgaggaccacctggagcaggtgttagaggctgctgcccgggcc
gcccgtgatgtgcacaccctgctggaccgtgtggtccggcagcatgtacatgaggcctcc
atcttgctgggggactga
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