Equus caballus (horse): 100063465
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Entry
100063465 CDS
T01058
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X2
KO
K16499
protocadherin delta 2
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecb04515
]
100063465 (PCDH18)
Cell adhesion molecules [BR:
ecb04515
]
Cadherins
Protocadherins
100063465 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
BBS1
TMEM154
PAH
Syndecan
MPS-4
Cadherin_C_2
ATG31
DUF3418
Motif
Other DBs
NCBI-GeneID:
100063465
NCBI-ProteinID:
XP_003364564
Ensembl:
ENSECAG00000022715
VGNC:
21191
LinkDB
All DBs
Position
2:93801615..93815134
Genome browser
AA seq
1131 aa
AA seq
DB search
MNAKMHFRFVFAILMVSFNAEVLSKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPNPST
VRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQLFHI
EVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSANDFFN
IEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNS
PAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKIDSER
GHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMSPGK
EEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTNATL
DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSPGAY
ITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQITF
VVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPTLRNNTAEISIPKGADSGFHVTRI
RAIDRDSGANAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVIIQDKGN
PQLHTKVLLKCMILEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLFATR
CNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSP
TLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQGQYQ
PRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDL
FLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQQHPH
QSLEDDAQPADSGEKKKSFSTFGKDSPNDEDSGDNSTSSLLSEMSSVFQRLLPPSLDTYS
ECSEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSVQPSSK
WLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctaaaatgcactttagattcgtttttgcaatcctgatggtatctttcaacgcc
gaggtactgagcaagaatttgaaatacaggatttatgaggagcagagggttggatcagta
attgcaagactatctgaggatgtggctgatgttttagttaagctaccgaatccttccact
gttcgttttcgagccatgcaaaggggaaattctcctctacttgtagtaaatgaggataat
ggggaaatcagcataggggctaaaattgaccgtgaacaactatgccagaaaaacttgaac
tgttccattgagtttgatgtgatcactctgcccactgagcatctgcagcttttccatatt
gaagtcgaagtgctggatattaatgacaattctccccagttttcaagatctctcatacct
attgagatatcagagagcgcagccgtggggactcgtatccccctggacagtgcatttgat
ccagatgttggggaaaattccctccacacatattctctctctgccaatgatttttttaat
attgaggttcggaccaggactgatggagccaagtatgcagaactcatagtggtgagagag
ctggatcgggagctgaagtcgagctatgagcttcagcttactgcctcagacatgggggtg
cctcagaggtctggctcatccattctgaaaatcagcatttcagactccaatgacaacagc
cctgcttttgagcagcagtcttatataatacaactcttagaaaactccccggttggcact
ttgctcctagatctgaatgccactgatccagatgagggcgctaatgggaaaattgtatat
tccttcagcagtcatgtgtctcctaaaattatagagacttttaaaattgattcagagaga
ggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctatgagattgac
gttcaggctcaagatctgggtccgaattcaatcccagctcattgcaagattataattaag
gttgtagatgttaatgacaataaaccggaaataaacataaacctcatgtcccctggaaaa
gaagaaatatcttacatctttgaaggggatcctattgacacatttgttgctttagtcagg
gttcaggacaaagattctgggctgaatggagaaatcgtttgtaagcttcatggacatggt
cactttaaacttcaaaagacttatgaaaacaattatttaatcttgacaaatgccacactg
gatagagaaaagaggtctgaatacagcttgactgtaatcgctgaggacaaggggacaccc
agtctctctacagtaaaacattttactgttcaaatcaatgatataaatgacaatccaccc
cacttccagagaagtcgatatgaatttgcaatctcggagaataactcgcctggggcgtat
atcacaactgttacagccacagatcctgatcttggggaaaatggacaagttacatatacc
attttggagagttttatcctaggaagttccataactacatatgtaactattgacccatct
aatggagccatttatgccctcagaatctttgatcatgaagaagtgagtcagatcactttt
gtggtcgaagccagagatggaggaagtccgaagcaacttgtaagcaatactacagttgtg
cttaccatcattgatgaaaatgataatgtccctgtggttatagggcctacactgcgcaat
aatactgcagaaatctccatccccaaaggggctgacagtggctttcacgtcacaagaata
agggcaattgacagagactctggtgcaaatgctgaactcagctgctccatcgtagcaggt
aatgaggagaatatctttgtaattgatccccggtcatgtgacatccataccaatgtgagc
atggaatctgttccctacacagaatgggagctctcagttatcatccaggacaaaggcaat
cctcagctgcataccaaagtccttctgaagtgcatgatccttgaatatgcagagtcagtg
acaagtacagcaatgacctcagtaagccaggcatctttggatgtctccatgattataatt
atttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttcgcaacgagg
tgtaaccgagaaaagaaagatactagatcctacaactgcagggtagcagaatccacttac
cagcaccaccccaaaagaccatccaggcagattcacaaaggggacattacattggtgcct
accataaacggcactctgcccatcagatctcatcacagatcgtctccatcttcatctcct
accttagaaagaggacaaatgggcagccggcagagtcacaacagtcaccagtctctcaac
agtttggtgacaatctcatcgaaccacgtgccagagaatttctccttagaactcacccat
gccactcctgctgttgaggtctcccagcttctttcaatgcttcaccagggacaatatcag
ccaaggccaagttttcgaggaaacaaatattccaggagctatagatatgctcttcaagac
atggacaaatttagcttgaaggacagtggccgtggtgacagtgaagcaggagacagtgat
tatgatttggggcgagattctccaatagacaggctgctgggtgaaggattcagcgacctg
tttcttacagatggaagaattccagcagctatgaggctctgcacggaggagtgcagagtc
ctgggacactctgaccagtgctggatgccgccgctgccctcaccatcctctgactatagg
agtaacatgttcattccgggggaagaattcccagcacagccccagcagcagcatccacat
cagagtcttgaagatgacgcccagcctgcagactctggtgagaagaagaagagtttctcc
acttttgggaaggactccccaaacgatgaggactctggagataacagcacatcttctctg
ctttcggaaatgagcagcgtgttccagcgcctcttacccccttccctggacacctattct
gagtgcagtgagatggatcggtccaactctctggaacgccggaagggacctttgccagcc
aagactgtgggttacccacaaggggtggcggcctgggcagccagtacacattttcaaaat
cccaccaccaactctgggcccccacttggaactcattccagtgtgcaaccttcttcaaaa
tggctgccggccatggaggagatccctgaaaattatgaagaagatgattttgacaatgtg
ctcaaccacctcaacgacgggaaacatgaactcatggatgccagtgagctagtggctgag
attaacaaactgctccaggatgtccgccagagctag
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