KEGG   Equus caballus (horse): 100063465
Entry
100063465         CDS       T01058                                 
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X2
  KO
K16499  protocadherin delta 2
Organism
ecb  Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ecb04515]
    100063465 (PCDH18)
Cell adhesion molecules [BR:ecb04515]
 Cadherins
  Protocadherins
   100063465 (PCDH18)
SSDB
Motif
Pfam: Cadherin Cadherin_2 BBS1 TMEM154 PAH Syndecan MPS-4 Cadherin_C_2 ATG31 DUF3418
Other DBs
NCBI-GeneID: 100063465
NCBI-ProteinID: XP_003364564
Ensembl: ENSECAG00000022715
VGNC: 21191
LinkDB
Position
2:93801615..93815134
AA seq 1131 aa
MNAKMHFRFVFAILMVSFNAEVLSKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPNPST
VRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQLFHI
EVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSANDFFN
IEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNS
PAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKIDSER
GHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMSPGK
EEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTNATL
DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSPGAY
ITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQITF
VVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPTLRNNTAEISIPKGADSGFHVTRI
RAIDRDSGANAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVIIQDKGN
PQLHTKVLLKCMILEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLFATR
CNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSP
TLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQGQYQ
PRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDL
FLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQQHPH
QSLEDDAQPADSGEKKKSFSTFGKDSPNDEDSGDNSTSSLLSEMSSVFQRLLPPSLDTYS
ECSEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSVQPSSK
WLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq 3396 nt   +upstreamnt  +downstreamnt
atgaatgctaaaatgcactttagattcgtttttgcaatcctgatggtatctttcaacgcc
gaggtactgagcaagaatttgaaatacaggatttatgaggagcagagggttggatcagta
attgcaagactatctgaggatgtggctgatgttttagttaagctaccgaatccttccact
gttcgttttcgagccatgcaaaggggaaattctcctctacttgtagtaaatgaggataat
ggggaaatcagcataggggctaaaattgaccgtgaacaactatgccagaaaaacttgaac
tgttccattgagtttgatgtgatcactctgcccactgagcatctgcagcttttccatatt
gaagtcgaagtgctggatattaatgacaattctccccagttttcaagatctctcatacct
attgagatatcagagagcgcagccgtggggactcgtatccccctggacagtgcatttgat
ccagatgttggggaaaattccctccacacatattctctctctgccaatgatttttttaat
attgaggttcggaccaggactgatggagccaagtatgcagaactcatagtggtgagagag
ctggatcgggagctgaagtcgagctatgagcttcagcttactgcctcagacatgggggtg
cctcagaggtctggctcatccattctgaaaatcagcatttcagactccaatgacaacagc
cctgcttttgagcagcagtcttatataatacaactcttagaaaactccccggttggcact
ttgctcctagatctgaatgccactgatccagatgagggcgctaatgggaaaattgtatat
tccttcagcagtcatgtgtctcctaaaattatagagacttttaaaattgattcagagaga
ggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctatgagattgac
gttcaggctcaagatctgggtccgaattcaatcccagctcattgcaagattataattaag
gttgtagatgttaatgacaataaaccggaaataaacataaacctcatgtcccctggaaaa
gaagaaatatcttacatctttgaaggggatcctattgacacatttgttgctttagtcagg
gttcaggacaaagattctgggctgaatggagaaatcgtttgtaagcttcatggacatggt
cactttaaacttcaaaagacttatgaaaacaattatttaatcttgacaaatgccacactg
gatagagaaaagaggtctgaatacagcttgactgtaatcgctgaggacaaggggacaccc
agtctctctacagtaaaacattttactgttcaaatcaatgatataaatgacaatccaccc
cacttccagagaagtcgatatgaatttgcaatctcggagaataactcgcctggggcgtat
atcacaactgttacagccacagatcctgatcttggggaaaatggacaagttacatatacc
attttggagagttttatcctaggaagttccataactacatatgtaactattgacccatct
aatggagccatttatgccctcagaatctttgatcatgaagaagtgagtcagatcactttt
gtggtcgaagccagagatggaggaagtccgaagcaacttgtaagcaatactacagttgtg
cttaccatcattgatgaaaatgataatgtccctgtggttatagggcctacactgcgcaat
aatactgcagaaatctccatccccaaaggggctgacagtggctttcacgtcacaagaata
agggcaattgacagagactctggtgcaaatgctgaactcagctgctccatcgtagcaggt
aatgaggagaatatctttgtaattgatccccggtcatgtgacatccataccaatgtgagc
atggaatctgttccctacacagaatgggagctctcagttatcatccaggacaaaggcaat
cctcagctgcataccaaagtccttctgaagtgcatgatccttgaatatgcagagtcagtg
acaagtacagcaatgacctcagtaagccaggcatctttggatgtctccatgattataatt
atttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttcgcaacgagg
tgtaaccgagaaaagaaagatactagatcctacaactgcagggtagcagaatccacttac
cagcaccaccccaaaagaccatccaggcagattcacaaaggggacattacattggtgcct
accataaacggcactctgcccatcagatctcatcacagatcgtctccatcttcatctcct
accttagaaagaggacaaatgggcagccggcagagtcacaacagtcaccagtctctcaac
agtttggtgacaatctcatcgaaccacgtgccagagaatttctccttagaactcacccat
gccactcctgctgttgaggtctcccagcttctttcaatgcttcaccagggacaatatcag
ccaaggccaagttttcgaggaaacaaatattccaggagctatagatatgctcttcaagac
atggacaaatttagcttgaaggacagtggccgtggtgacagtgaagcaggagacagtgat
tatgatttggggcgagattctccaatagacaggctgctgggtgaaggattcagcgacctg
tttcttacagatggaagaattccagcagctatgaggctctgcacggaggagtgcagagtc
ctgggacactctgaccagtgctggatgccgccgctgccctcaccatcctctgactatagg
agtaacatgttcattccgggggaagaattcccagcacagccccagcagcagcatccacat
cagagtcttgaagatgacgcccagcctgcagactctggtgagaagaagaagagtttctcc
acttttgggaaggactccccaaacgatgaggactctggagataacagcacatcttctctg
ctttcggaaatgagcagcgtgttccagcgcctcttacccccttccctggacacctattct
gagtgcagtgagatggatcggtccaactctctggaacgccggaagggacctttgccagcc
aagactgtgggttacccacaaggggtggcggcctgggcagccagtacacattttcaaaat
cccaccaccaactctgggcccccacttggaactcattccagtgtgcaaccttcttcaaaa
tggctgccggccatggaggagatccctgaaaattatgaagaagatgattttgacaatgtg
ctcaaccacctcaacgacgggaaacatgaactcatggatgccagtgagctagtggctgag
attaacaaactgctccaggatgtccgccagagctag

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