Equus caballus (horse): 100064285
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Entry
100064285 CDS
T01058
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04518
Integrin signaling
ecb04820
Cytoskeleton in muscle cells
ecb04974
Protein digestion and absorption
ecb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100064285 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100064285 (COL6A6)
04518 Integrin signaling
100064285 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100064285 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100064285 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100064285 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100064285 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100064285 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100064285 (COL6A6)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100064285 (COL6A6)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100064285 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
100064285 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
100064285
NCBI-ProteinID:
XP_001495285
Ensembl:
ENSECAG00000016169
VGNC:
52365
UniProt:
A0A9L0RCL8
LinkDB
All DBs
Position
16:68160765..68301758
Genome browser
AA seq
2272 aa
AA seq
DB search
MKMLLSLLLMIICSHVSVNQDSGPEYADLVFLVDSSDHLGTKSFPLVKIFITKLISSLPI
EANKYRVALAQYSDKFHSEFQLGTFKSRNPMLNHLRKNVSFTGGSLRIGNALQEAHRTYF
SGHANSRDKKQFPPILVVLASAESEDDVEEASKALRRDGVRIISVGVQKASEENLKAMAT
AQFHFNLRTVRDLSTFSQNMTQIIKDAAQYKDGAVNDILVEVCQGPSVADVVFLLDVSLN
GSQENFDYLKEFLEESVSALDIKENCMRVGLVAFSNETKVINSLSRGINKSEVLQYIQNL
SPQAGNAYTGAAIRKIRKEVFGAQNGSRKNQGVPQIAVLVTHRPSEDNVTKAAVNLRRQG
VTIFTMGIEGASDTQLEKIASHPAEQYVSKLKSFSDLAAHNQTFLKKLRNQITHTLSVFS
ERTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSELVGMFNIAPQKVRFGAVQ
YADSWDLEFEINKYSNKHDLGKAIENIRQMGGNTNTGAALNFTLGLLQKAKKERGNKVPC
HLVVLTNGVSKDSIVEPANRLREELIHVYAIGVREANQTQLREIAGEEKRMYYVHDFDAL
KDIRNQVVQEICAQEACKEMKADIMFLVDSSGSIGPENFSKMKIFMKNLVSKSQIGADRV
QIGVVQFSHVNKEEFQLNRYMSQSEISDAIDRMAHIGETTLTGHALTFVSQYFSPAKGAR
PNVRKFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDYDEYNIMKDFMTDLVKKA
DVGKNQVRFGALKYADDPEVLFYLDTLGTKWEVISVLQNDQPMGGNTYTAEALAFSDHMF
TEARGSRLQRGVPQVLIVITDGESHDADKLNATAKALRDKGILILAVGIAGANPVELLAM
AGSSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIGQIDLVFLMDGSNSIHPDDFKKM
KAFLASVVQDFDVTVNRVRIGAAQFSHNYQPEFPLGTFTGEEEISLQIEKIQQIFGYTHI
GAALRRVGRYFRPDMGSRINAGTPQVLLVLTDGQSQDEVAQAAEDLRRKGINIYSVGIGD
VDDQQLVQITGTADKKLTVHDFDELRKVKKRIVRHICTTGGESNCFVDVVVGFDIATQKS
GQTFLEGQSWMETYLQHILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSE
NILNSLKDITVKGPSLLNANLLSSLWDAFQNKSAARGKVVLLFSDGLDDDIEKLEQKSDE
LRKEGLNALVTVALDGAPDSGDLADLLYIEFGKGFEYRTQLSIGMRDLGSRLSKHLVNVA
ERTCCCLFCKCIGGDGAMGDPGPPGKKGSLGLKGSEGYLGEEGIAGERGATGPVGEQGTK
GCYGAKGPKGNRGLNGQEGDIGESGIDGLNGEQGDNGLAGGKGEKGDEGSQGSPGRRGIS
GDRGAKGWRGDPGFPGVDNSVEGPKGLKGERGRQGRRGSPGPPGTPGSRRKTAAHGRRGH
TGPQGTTGIPGPDGLEGSLGLKGPQGPRGEAGVKGDKGSLGGKGPQGPPGPGGEAGSQGH
LGSQGNKGEPGDLGEKGAAGLPGPRGLPGDDGAPGYGSFGSKGAKGQEGFPGESGPKGEI
GDPGGPGETGPKGVRGKTISTGLPGEPGSPGELGPPGRKGVKGAKGLALFSTCDLIQYVR
DHGPGGRGKPECPVHPTELVFALDQSRDVTEQEFERMKEIVSAFVRGIRVRENSCPVGAR
VAILSYNSHTRHLIRFSDTYKKNQLLREIEAIPYERSSAGREIGKTMRFISRNVFKRTLS
GPHTRRIAAFFSSGQSADAQSIATATMEFSALDIIPVVIAFSNVPSIKRAFMIDDTGTFQ
VVMIPPGADSAQALERLQRCTFCYDVCKLDASCDQAGPPPVQSYVDAAFLLDGSRHVGSA
EFEDIRDFLGALLDHFEITPEPKTSVTGDRVALLSHAPPNFLPNTQRSPVRTEFNLTTYN
SKRLMKRHMEESVRQLNGDTFIGHALQWTLDNIFLNTPNLRRNKVIFVISTGETSHLDRE
TLKKESLRAKCQGYALFVFSLGPAWNDKELEELASYPLDHHLVQLGRIHKPDHRYGVKFV
KSFINSIRRAINRYPPIHFKTKCNRLSSTDPKQPPQQLQSFVPGPHRAALKEDVLQKAKF
FQDKKYLSSVARVSRDHTVQTFTRNTFYTFKNGRKVIKTAPRQHDKGSTQRI
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgctgagtttgctcctcatgataatttgttcccatgtttctgtgaaccaa
gattctggccctgagtacgcagatttggtgtttctggtggacagctctgatcacctgggg
actaagtccttccctcttgtgaagatattcatcaccaaactgatcagcagtctccccata
gaggccaacaaataccgcgtggccctggctcagtacagtgacaaattccacagtgaattc
cagctgggcactttcaagagcagaaaccccatgctgaaccacctcaggaagaatgtcagc
ttcactggtggctccctgcggataggaaatgccctccaggaggctcacagaacctatttc
tctggacatgcaaacagtagagacaaaaaacagttccccccgattttggtggtcctggct
tcagctgagtctgaggatgacgtggaagaggcttccaaggccctgcggagagacggggtg
aggatcatctccgtgggggtgcagaaagcttctgaggagaacctgaaggccatggccacg
gctcagtttcatttcaaccttcggacggtcagagacctcagcacgttttcccaaaacatg
acacagatcatcaaggatgcggctcagtacaaggacggagcggtcaatgatattcttgta
gaagtttgccaaggcccttctgtggcagatgttgtgttcctgttggatgtgtcgctcaat
ggcagccaggagaacttcgactatcttaaagaattcctagaagaaagtgtatctgctctt
gacataaaggaaaattgcatgagagttggccttgtggccttcagcaatgagacaaaggtg
ataaattcactgagcaggggcataaataagtcagaggttctccagtatatacagaacctc
tctccccaggctgggaacgcctacactggagctgccatccgaaagatcaggaaggaagtt
ttcggtgcccagaatggcagtcggaagaatcaaggggtgccccagattgctgtgctggtg
acccacagaccatcggaagacaacgtgaccaaggcggccgtcaacctccggcgccagggg
gtgaccatcttcaccatgggcatagagggggccagcgacacccagctggaaaagatagca
tctcaccccgccgagcagtatgtctccaaactgaaaagcttctctgacctggccgctcac
aaccagacgtttctgaagaagctacggaaccaaataacacacacactctctgtcttctct
gaacggacagaaacgctcaaatccggttgtgtagacactgaagaagccgacatctacctg
ctcatcgatggctccgggagcacccaggccacagacttccacgaaatgaagaccttcctg
tcggagctcgtagggatgttcaacatcgctccccagaaggtgcgatttggggccgttcag
tacgccgacagctgggacttggaatttgagatcaataaatactctaacaagcacgatttg
ggaaaggccattgagaacatcaggcagatgggagggaatacaaacactggagcggccttg
aacttcacactggggctgttgcaaaaagcaaagaaggagcgcggaaacaaagtgccatgt
catcttgttgtcctgacgaatggtgtgtccaaggatagcattgtggagcccgcgaacaga
ctgagagaagagctcatccacgtttacgccatcggagtcagggaggccaaccagacacaa
ctgcgagaaatcgcaggcgaggaaaagaggatgtactatgtgcatgactttgacgctttg
aaagacataagaaaccaagtggtgcaagaaatctgtgctcaagaagcctgcaaagagatg
aaagctgacatcatgtttctggtggacagttctggcagtataggtcctgaaaacttcagc
aaaatgaaaatatttatgaaaaatctggtgagcaaatctcagattggggcagatcgggtg
caaatcggtgtagtccagttcagtcacgtcaataaggaagagtttcagctcaacagatac
atgtcccaaagtgaaatttcagacgcgatagaccgaatggctcacattggagaaaccacg
ttgactggtcatgccctgacctttgtgtctcagtacttcagccctgccaagggggcccgg
ccaaacgtcaggaagtttctcatcctcatcacagatggtgaagctcaggacatagtcaag
gacccagcagtagcacttcggcaagaaggcataatcatctattctgtgggggtgtttggc
tccaacgtcacccagctggaggagatcagcgggaggccggagatggttttttatgttgag
aattttgacattctacagcacattgaagatgatcttgtttttggaatatgcagcccccgt
gaagaatgcaagcggattgaagttttagacgttgtatttgtgattgacagctctggaagc
attgactatgatgaatataatatcatgaaggactttatgactgacttggtgaaaaaagcc
gatgttggcaagaatcaggtccggtttggggctctgaagtatgctgatgacccagaagtg
ctattctatctggatacccttggcacaaagtgggaggtgatttccgtgctccagaatgac
cagcccatggggggcaacacttataccgctgaggcactagccttctcagaccacatgttc
accgaagcccggggcagccgcctgcagaggggcgtcccccaagtcctcattgtgatcact
gatggggaatcgcatgatgcagacaagctcaatgccacagccaaggccttgcgggacaaa
ggcattcttatcctggccgtgggaattgctggtgccaatcccgtggagctgctggccatg
gcaggatcgagtgacaagtacttcttcgtggagacttttggaggcctaaaggggatattt
tcagatgtgtcagctagtgtgtgtaactcttcaaaagtagattgtgaaattggacagata
gatcttgtcttcctcatggatggttcaaatagcattcatccagatgacttcaagaagatg
aaggcattcttggcatccgttgttcaagactttgatgtcactgtcaacagagtgcgtata
ggagcggcccaatttagccataactatcagccagagtttccactgggaactttcacaggc
gaagaggagatatcacttcagattgaaaagatccagcagatctttggatatacccacatc
ggcgctgcgctccggcgggtggggcgttacttccgaccagacatgggcagccggataaat
gcaggtaccccacaggtgttactggttctcacagatggccagtcccaagatgaggtggct
caggccgctgaggacctgagacgcaaagggatcaacatttactccgtgggcatcggggat
gtggatgaccagcagctcgttcagatcactgggacggcagataaaaaactgacggttcat
gacttcgatgaactgagaaaggtcaagaagaggatagttcgccacatctgtaccacgggg
ggagagagcaattgttttgtggacgttgtagtgggatttgacatcgcaactcagaagagt
gggcagacttttcttgaaggtcagtcttggatggaaacttaccttcaacacatcttacgt
gccatcagctccctcaatggggtaagctgtgaggtgggcacagagactcaggttagtgtg
gcttttcaagtgaccaatgctatggaaaaatattcccccaagtttgagatctatagtgaa
aacatactgaacagcttgaaggatataacggttaaaggaccatctcttctcaacgccaac
ctcttgagttctctatgggacgcatttcagaataaatcggccgctcgaggaaaggtggtt
ctcttgttttcagatggattggatgatgatattgaaaaactcgaacaaaaatctgatgaa
cttagaaaagaaggcctgaatgcccttgtaactgttgctctggatggagcccctgactcg
ggtgacctggctgatcttctctacattgaatttgggaaaggatttgagtacaggacccag
ctcagtattggaatgagggatcttgggagccgactgtcaaagcatctggtcaatgttgct
gaaaggacgtgctgctgtttattctgcaagtgcattggaggagatggcgcaatgggagat
cctggaccaccagggaaaaagggatccctcggtttaaaaggcagtgaaggctacctggga
gaggagggcattgctggagaaagaggagccactgggccagtgggagaacagggtacgaag
ggatgttatggcgccaaaggtcctaagggaaacaggggactaaatggacaggagggagac
attggggaaagtggaattgatggattaaatggagaacagggtgacaatggtcttgctgga
ggaaaaggagaaaaaggtgatgaaggctctcagggaagcccaggaaggagggggatttct
ggtgaccgtggagcaaagggctggcggggagaccctgggtttcctggagttgacaatagt
gtagaaggacccaagggcttgaaaggagaacgtggaagacaaggtagaagaggctcacca
ggtccccctgggacaccaggctccagaagaaagacagcagctcatggccgaaggggacat
acaggcccccaggggacaacaggcatcccgggcccagatggacttgaaggctcactggga
cttaagggccctcagggtccaagaggagaggctggtgtgaaaggagataaaggaagtctg
ggaggtaaaggtccccaggggcctccaggaccaggaggagaggccgggagtcaaggccat
ctgggaagccaaggcaataaaggagaacctggagacctgggagaaaaaggagctgcgggc
cttcctggtcctcgaggcttgccgggagatgatggcgccccaggttatggtagctttggg
agtaaaggagcaaaggggcaagaaggattccctggagaaagtggacctaagggtgagatt
ggggaccctggtggtccaggagaaactggacccaagggagttagaggcaagacgatatct
acggggctgccaggagaaccaggatcccccggggagctgggacctcccggacgcaagggt
gtgaaaggggccaaaggattggctttgttttccacatgtgacctcattcagtatgtgcgg
gaccacggtcctggcggacgtggaaaaccagaatgccccgtgcatccaacagagctggtg
ttcgctttagaccagtcccgggatgtgaccgagcaggaatttgagcggatgaaggagata
gtatctgccttcgtgagaggcattcgagtccgggagaacagctgcccggtaggggcgcgc
gtcgccatcctctcctataactcccacaccaggcaccttatccgcttctcagacacctac
aagaagaaccaacttctcagggaaattgaagctattccatatgagagatcctcagccggc
agggagattggcaaaacaatgaggtttatttccaggaatgtcttcaagcggaccctctca
gggcctcacacaagaagaatcgccgcgtttttcagcagtggtcaatctgccgatgcccaa
tccattgccacagccaccatggagttcagcgcccttgacatcattccagtcgtgattgct
ttcagcaacgtgccctccatcaagcgtgcatttatgatcgatgacactggcaccttccaa
gtagtaatgatcccacccggggctgactccgcgcaagccttagagagactccagcggtgc
actttctgctatgatgtgtgcaaactggatgcttcttgcgatcaagctggaccaccccct
gtgcagtcttacgtggatgctgctttccttctggatggctctcggcatgtaggaagtgct
gaatttgaagacataagagactttctgggagcactgttagatcactttgaaatcacccca
gagcccaagacctctgtcactggagaccgggtggccctgttaagccacgctccccccaac
ttcctacccaacactcagaggagtcctgttagaactgagttcaaccttaccacctacaac
agcaaacgcctcatgaagaggcacatggaagaatcagttcgacaactaaatggagacact
ttcatcggtcacgccttacagtggactctggacaatatctttttaaacacacccaatctg
agaagaaacaaagtcatatttgtgatatctactggggaaaccagtcatttggacagggaa
accttaaagaaagaatccttgagagccaaatgtcaaggttatgccttatttgtgttttcc
cttggccctgcttggaatgacaaggaactggaagagctggccagctaccctttggatcac
cacttggtccagcttggccgaattcataaacctgaccacagatatggtgtgaagtttgtg
aagtcctttataaactcaatcaggcgtgcaatcaacagatatccaccaatacacttcaaa
acaaagtgcaatagactcagctctacggacccgaagcagcctccacagcagttgcagagc
tttgttcctggaccacacagagctgccctcaaagaagatgtgttacagaaggcaaaattc
tttcaagataaaaaatatctttcaagtgtagcaagagtcagcagagatcatactgttcaa
acttttaccagaaatacattctacacctttaaaaatggaagaaaggtgataaaaactgct
cccagacaacatgataaaggaagtactcaaagaatttag
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integrated database retrieval system
