Equus caballus (horse): 100064345
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Entry
100064345 CDS
T01058
Symbol
HCN1
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100064345 (HCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100064345 (HCN1)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100064345 (HCN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
DUF1759
Motif
Other DBs
NCBI-GeneID:
100064345
NCBI-ProteinID:
XP_023481442
Ensembl:
ENSECAG00000007584
VGNC:
18711
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All DBs
Position
21:22028334..22397899
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AA seq
880 aa
AA seq
DB search
MEGGGKPNSSSNSRDDGNSVFPAKAPATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFK
VDGGGGGGEEPAGGCEDAEGPRRHYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQER
VKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVF
LLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSE
VYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMML
LLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAP
VSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAD
MRQKIHDYYEHRYQGKIFDEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTA
MLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTK
GRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQ
KDLNTGVFNNQENEILKQIVKHDREMVQAIAPINYPQMTALNSTSSTTTPTSRMRTQSPP
VYSATSLSHSNLHSPSPSTQTPQSSAILSPCSYTTVVCSPPVQSPLATRTFHYASPTASQ
LSLMQQQQQLQQSQPPQPQQQPQQPQTPSSSTPKNDVHKSTQALHNTSLTRDVRPLSASQ
PSLPHEVSTLISRPHPTVGESLASIPQPVTAVHGTGLQAGGRGTVPQRVTLFRQMSSGAI
PPNRGVPPAPPPPAAALPRESSSVLSTDPDAEKPRFASNL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggcggcaagcccaactcctcgtccaacagccgggacgatggcaacagcgtc
ttccccgccaaggcgcccgcgacgggcgcggggccggcagcggccgagaagcgcctgggc
actccgccggggggcggcggggccggcgccaaggagcacggcaactccgtgtgcttcaag
gtggacggcggcggcggcggcggcgaggagccggccgggggctgcgaggatgccgagggg
ccccggcggcactacggcttcatgcagaggcagttcacctccatgctgcagcctggggtc
aacaaattctccctccgcatgttcgggagccagaaggcggtggagaaggagcaggaaagg
gttaaaactgcaggcttctggattatccacccttacagcgatttcaggttttattgggat
ttaataatgcttataatgatggtcggaaatctggtcatcataccagttggaatcacattc
tttacagaacaaacaacaacgccatggattattttcaatgtggcatcagatacagttttc
cttttggacctgatcatgaattttaggactgggactgtcaatgaagacagttctgaaatc
atcctggaccctaaagtgatcaagatgaattatttaaaaagctggtttgtggttgacttc
atctcatcaatcccagtggattatatctttctcattgtagaaaaaggaatggattcagaa
gtttacaagacagccagggcacttcgcattgtgaggtttacaaaaattctcagtctcttg
cgtttgttacgactttcaaggttaattagatacatacatcagtgggaagagattttccac
atgacgtatgaccttgccagtgcggtagtgagaatttttaacctcatcggcatgatgctc
ctcctatgtcactgggatggctgtcttcagttcttagtgccgctcctgcaggatttccca
ccagattgctgggtgtctctaaatgaaatggttaatgattcttggggaaagcagtattca
tacgcgctcttcaaagccatgagtcacatgctgtgtattgggtatggagcccaggcccca
gtcagcatgtccgacctctggatcaccatgctgagcatgatcgtcggggccacctgttac
gccatgtttgtgggccatgccacagctctaatccagtctttggattcctcaaggcggcaa
tatcaagagaagtataagcaagtagaacaatacatgtcattccataagttaccagctgat
atgcgtcagaagatccatgattactatgaacacagataccaaggcaaaatctttgatgag
gaaaatattctcaatgaactcaatgatcctctgagagaggagatagtcaacttcaactgt
cggaaactagtagctacgatgcctctttttgctaacgcggatcctaattttgtgactgcc
atgctgagcaagttgagatttgaggtgtttcaacctggagattatatcatacgagaagga
gctgtgggtaaaaaaatgtatttcattcaacatggtgttgctggtgtcatcacaaaatcc
agtaaagaaatgaagctgacagatggctcttactttggagagatttgcctgctgacgaag
ggacgtcgcactgccagtgttcgagctgatacatattgtcgtctttattcattgtctgtg
gacaatttcaatgaggtcctggaggaatatccaatgatgagaagagcctttgagacagtt
gccattgaccgactggatcgcataggaaagaaaaattcaattcttctgcaaaagttccag
aaggatctaaacactggtgttttcaacaatcaggagaacgagatcctgaagcagattgtg
aaacacgaccgggagatggtacaggcaatcgctcccatcaattatcctcaaatgacagcc
ctgaattctacatcttcaactactaccccgacctctcgcatgaggacacaatctccgccg
gtgtactcagcgaccagtctgtctcatagcaacctgcattcccccagtcccagcacacag
accccccagtcctcagccatcctctcaccttgctcctacaccactgtggtctgcagccct
cctgtacagagcccactggccactcgaactttccactatgcctcccccactgcttcccag
ttgtcactcatgcagcaacagcagcagttacagcagtcccagccaccacagccccagcag
cagccccaacagccacagacacccagcagctccacgccgaaaaacgacgtgcacaagagc
actcaggcgcttcacaacaccagcctgacccgagacgtcaggcccctctctgcctcgcaa
ccctcgctgccccatgaggtttccaccctgatatccagacctcatcccactgtgggtgag
tccctggcctccatccctcagcctgtgacagctgtccacggcacaggccttcaggccggg
ggcaggggcactgtgccccagcgagtcaccctgttccgacagatgtcgtcaggagccatt
cccccaaaccgaggagtccctccagcgccccctccaccagcagctgctcttccgagagag
tcttcctcagtcttaagtacagacccagatgcagaaaagccacgatttgcttcaaattta
tga
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