Equus caballus (horse): 100064447
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Entry
100064447 CDS
T01058
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ecb
Equus caballus (horse)
Pathway
ecb03022
Basal transcription factors
ecb05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100064447 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100064447 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100064447 (TAF4B)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100064447 (TAF4B)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100064447 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
100064447 (TAF4B)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100064447 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
100064447
NCBI-ProteinID:
XP_023503363
Ensembl:
ENSECAG00000016769
VGNC:
23852
LinkDB
All DBs
Position
8:50836190..50972756
Genome browser
AA seq
864 aa
AA seq
DB search
MPAGLSEPAGAAPPAAVSASGTVTMAPAAALPVRLESTPVALGAVTKAPVSVCVESTVSQ
PLRSPLGTLVTKVAPVTSLPKVSSGPRLPAPQIVAVKAPNTTTIQLPANLQLPPGTVLIK
SNSGQLMLVSPQQAVTRAETTSNITSRPAVPVNTQTVKICTMPNSSSQLIKKMAVAPVKK
LTQIATTVVTTVPKPSSVQSVAVPTNVVTVTPVKPLNTVTTLKPSSVGASPAPSNEPSLK
AENSAAAQTDLSPTMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDGKIEA
EEFTRQLYVELKSSPQPHLVPFLKKSVIALRQLMPNSQSFIQQCVEQTSSEIIIATCTAT
VTASPVVTTTVSSIQPEKPIIVSGATTPRTVSVQTLNPLAGPGAAKTGVVTLHSVGSAAG
PGGATAGTVLLQTPKPLVTSIQNTVTAVSLQPEKPVVSGAAVTLALPSVTFGETSAAAIC
LPSVKPVVTSAGTTSDKPVLGAPVQIKLAQPGPILSQPAGIPQAVKVKQLVVQQPSGGIA
KQVTTLSHSSALTIQKSGQKKMPVNTAIPTSQFPPASILKQITLPGNKILSLQASPVQNN
KIKENGTTSFRNEDDINDVTSMAGVNLNEENACILATNTELVGTLIQSCKDEPFLFIGAL
QKRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTTYKASENYILSS
DTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQ
IQQRDANLTALAAIGPRKKRPLESGSGSEGLKDNLLASGTSSLTATKQMLRPRITRICLR
DLIFCMEQEKEMKYSRALYLALLK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgggcctcagcgagccggccggcgccgctccgcccgccgctgtgagcgcctcc
gggaccgtgaccatggcccctgccgcggctctgcccgtccggctggagagcaccccggtg
gccttgggcgccgtgactaaggctcctgtcagtgtctgcgtggagtccacggtgtcccag
cccctgcggtcccctctggggaccctggtgaccaaagtggctcctgtcacttctcttcct
aaagtcagcagcggccctcggctgcctgctcctcagatagtggctgtgaaagcccccaac
accaccaccatccagttgcctgctaacttgcagcttcctccaggaacagttttgatcaaa
agtaacagtggtcagttgatgttggtgtctcctcagcaagctgtaacaagagccgagact
acaagtaacataacttcaaggccagctgtaccagtgaatactcaaacagtcaaaatctgt
accatgccgaattctagttcacagttaatcaagaaaatggcagtcgcacctgttaaaaaa
ttgacacaaatagcaactactgtagtaaccactgttccgaagccttcctcagtacaatct
gtggctgtgccaaccaatgttgtcacagttacccctgtaaagccgttgaatactgtaact
accctgaagccttcaagtgtgggagcatcacctgccccctcaaatgagcccagcctcaaa
gcagagaactcagcggctgctcagactgatctttctccgacgatgctagaaaatgtgaag
aaatgtaagaacttccttgcaatgttaataaaactggcatgtagtgggtcacagtcccca
gaaatggggcagaatgtgaagaagctggtggaacaacttttggatggaaaaattgaagca
gaagaatttactagacaactgtatgttgaactcaagtcttcaccgcagcctcacctagtt
ccttttcttaagaaaagtgtgattgccttacgacaactcatgcctaactcccagagcttt
attcagcagtgtgttgagcagacttctagcgagataatcattgctacctgtactgcaaca
gtaacagcttctcctgtggtgacaacgacagtttcctcaatccagcctgaaaagcctatc
attgtttctggagcaacaacacccagaactgtgtcagtgcaaactctgaatccacttgct
ggtccaggggcagcaaaaactggagttgtgacacttcattctgtgggctcagctgctggg
ccaggaggagcaacagctggaactgttttgcttcagactccaaaaccgcttgtgacatcg
atccaaaacacagtgacagcagtctcccttcaacccgaaaagccagttgtctctggggca
gcagtaacgctggcccttccatcagtaacttttggagaaacttcagctgcagctatttgt
cttccgtctgtgaaacctgttgttacttctgctgggaccacatcagacaagcctgtcctt
ggtgcgccagtccagatcaaacttgcacagccgggccccatcctttcacaaccagctggt
attccacaggcagtgaaagtcaaacaactagtagtccagcagccttcaggaggcattgca
aaacaagtgaccacactttcccattcctcagcattgaccattcagaaatctggacagaag
aagatgcctgtgaacactgcaatacccaccagtcagtttcctccagcttccattctaaag
caaattaccctaccaggaaataaaattctatcacttcaagcatctcctgttcagaataat
aaaataaaagagaatggaacaacatctttcagaaatgaagatgacatcaatgatgtgact
tccatggcaggggtcaacctcaatgaagaaaatgcctgcatcttagcaacaaacactgaa
ttggttggcacactcattcagtcatgtaaagatgaaccatttcttttcattggagcatta
caaaagagaattttagacattggtaaaaagcatgacattacggaacttaactctgatgct
gtaaatttgatctcccatgcaacacaggaacgattacgaggccttctagaaaaactgact
acaattgctcagcatcgaatgacaacttacaaggcaagtgaaaattacatcctgtctagt
gacaccaggtcacagctcaaatttcttgaaaagctggatcaattagagaagcagagaaag
gatttagaagaaagagaaatgttacttaaggcagccaagagtcgttccaataaagaagat
ccagaacagctgagattaaagcagaaagccaaagagttacaacagttggagctcgcacag
atacagcaaagagatgctaatctcacagctcttgcagctattggaccaaggaagaagaga
ccactagaatctgggtctggaagtgagggcttaaaagacaaccttcttgcttctgggaca
tccagcctgacagccaccaaacagatgcttcgtccaagaatcacgaggatctgccttaga
gacttgatattctgcatggaacaggaaaaggagatgaagtactctcgagctctatacctt
gcccttctaaagtga
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