Equus caballus (horse): 100064492
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Entry
100064492 CDS
T01058
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb04714
Thermogenesis
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100064492 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100064492 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100064492 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100064492 (SMARCC1)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100064492 (SMARCC1)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100064492 (SMARCC1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100064492 (SMARCC1)
PBAF complex
100064492 (SMARCC1)
GBAF(ncBAF) complex
100064492 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
100064492
NCBI-ProteinID:
XP_023476284
Ensembl:
ENSECAG00000007760
VGNC:
23323
UniProt:
A0A9L0RNF0
LinkDB
All DBs
Position
16:40718413..40882375
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGSGGLGAAAGATSAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEEAITTGG
KEDEDPSKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDGQQPEKAENKGENETDEGDKAQDGENEKNGEKEQDSEVSEDAKSEEKETDENKE
LTDTCKERESDIGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLATLGTAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQPMPGRMIPTVAANIHPPGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ
QQPPPPPADGVPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcagcggcgggttgggggcggcggcgggcgccacgagtgcagga
ggtgcggcggcggccgcaggcctggccgtttatcggcggaaggacgggggcccggccagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcagatgctcctaccaataaaacgctggctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaactccctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgatcttcag
aatccatcccgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattggtg
cagagcaattgtctgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcaggggacatttactgatgagaagtca
aaagcttcccaccacatttatccatatccttcctcacaagaggatgaagaatggttgaga
ccagtgatgagaaaagacaagcaggtgttagtgcattgggggttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccaattccagaa
aagccatggaaggttcatgcgaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatt
tcaacaaagaacgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct
aatgctcgaaagaggaaacattcgccttcccctccgcctcccacacccacagaatcccgg
aagaagagtgggaagaaaggccaagctagtctttatgggaagcgcagaagtcagaaagaa
gaggatgagcaggaagatcttaccaaggacatggaagacccaacccctgtacccaacata
gaggaagtcgtgcttccgaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtagcagatctagatgaacaagatgaagaagcaatcacgacaggagga
aaggaagatgaagatcctagcaaaggtgatcagagtcggtcagttgaccctggtgaagat
aatgtgacagagcagaccaatcacattatcattcctagctatgcatcatggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatgggaaaaacaag
tcgaagactccagagatatacttggcatatcgaaattttatgatcgacacatatcgccta
aaccctcaagaatatttaactagcactgcttgtcggaggaacttgactggagatgtgtgt
gctgtgatgagggttcatgcctttttagagcaatgggggctcgttaattaccaagtggat
ccagaaagtcgacccatggcaatgggaccgcctccgactcctcatttcaatgtattagct
gatactccatctgggcttgtgcctctacatcttcgatcaccacaggtccctgctgctcag
cagatgttaaattttcctgagaaaaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgatatctactccaagaaaaccttagcaaagagtaaaggtgctagtgcggga
agagaatggactgaacaggaaacccttctactcctggaggccctggagatgtacaaggat
gattggaacaaagtatcagaacatgttggaagtcgtactcaggatgaatgcatcctccac
tttttgaggcttcccattgaggacccataccttgagaattcagatgcttctcttgggccc
ttggcctaccagcctgtccccttcagtcaatcaggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaagcagctttggag
gaattttctcgggttcgggaagaggtaccactggaattggttgaagctcatgtgaagaaa
gtacaggaagcagcacgagcctctgggaaagtggatcccacctatggcctggagagcagc
tgcattgcaggcacagggccggatgaaccagagaaacttgaaggagctgaagaggaaaaa
atggaaacagatactgatggtcagcagcctgaaaaggcagaaaataaaggggaaaatgaa
acagatgaaggtgataaagcacaagatggagaaaatgaaaaaaatggtgagaaggaacag
gatagtgaagttagtgaggatgccaaatcagaagaaaaggagactgatgagaacaaggaa
ctcactgatacttgtaaagaaagagaaagtgatattggaaagaaaaaagtagaacatgaa
atctctgaaggaaatgtagccacagccgcagcagctgctcttgcctcagctgcaaccaaa
gccaagcacctggctgctgtggaggaaaggaagatcaagtctctggtagctctcctggtt
gagacgcagatgaagaagctagagatcaaactgcgacattttgaggagctggagactatc
atggacagagagaaagaggctttagaacaacagaggcagcagttgcttactgaacgccaa
aacttccacatggaacaactgaaatatgctgaattgcgagcccgacagcaaatggaacag
cagcagcatgggcagaaccctcaacaggcacaccagcattcaggaggacctggcctggca
acacttggaacagcagggcaccctggcatgatgcctcatcagcagccccctccctaccct
ctgatgcaccaccagatgccgccacctcatccaccccagccaggtcagataccaggccca
ggttccatgatgcctgggcagcccatgccaggccgaatgattcccactgttgcggccaac
atccacccccctgggagtggccctacccctcctggtatgcctccaatgccaggaaacatc
ttaggaccccgggtacccctcacggcacctaatggcatgtatccccctccgccgcagcag
cagcagccaccaccaccacctgcagatggagtccctccacctcctgctccaggcccacca
gcctcagctgctccctag
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integrated database retrieval system
