Equus caballus (horse): 100064523
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Entry
100064523 CDS
T01058
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
ecb03040
Spliceosome
ecb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100064523 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
100064523 (NCBP1)
03015 mRNA surveillance pathway
100064523 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100064523 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100064523 (NCBP1)
03041 Spliceosome [BR:
ecb03041
]
100064523 (NCBP1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100064523 (NCBP1)
Spliceosome [BR:
ecb03041
]
Common components
Common spliceosomal components
Cap binding complex
100064523 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
100064523
NCBI-ProteinID:
XP_005605698
Ensembl:
ENSECAG00000013847
VGNC:
20581
UniProt:
A0A3Q2GT55
LinkDB
All DBs
Position
25:4683693..4733728
Genome browser
AA seq
793 aa
AA seq
DB search
MRIIIQFKPNVPVARGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVL
EADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLK
ANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSL
PWVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQ
KLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDD
PEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFA
ELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWF
SHHLSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALC
PANPTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGF
SFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNH
PQMIAVLVDKMIRTQIVDCAAVATWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQK
ELEEAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRF
IMILTEHLVRCESDGTSVLTPWYKNCVERLQQIFLQHHQIIQQYMVTLENLLFTAELDPH
ILAVFQQFCALQA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcatcatacagttcaagccaaatgttccagtggcaaggggacagcctcacaaa
aggagaaaaacttctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaa
gtaggagaaaagagtgcctgctctttggagagcaacctagaaggcttggctggtgttctg
gaagctgatcttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgg
ctgttacctgagaagttgaccatttatacaacgttagttggactgctgaacgccaggaat
tacaactttggtggagaatttgtagaagccatgattcgtcaacttaaagaatcattgaaa
gcaaacaattataatgaagctgtgtatttggtccgctttttatctgatctggtgaattgt
cacgtcattgcggccccgtcgatggttgctatgtttgaaaattttgtaagtgtaactcag
gaagaagatgtgcctcaggtgcgacgggattggtacgtgtatgcatttctgtcatctttg
ccctgggttggaaaggagttgtacgaaaagaaagatgcagagatggaccgcatctttgcc
aacactgaaagctatcttaaaagacgccaaaagactcatgtgcccatgttacaagtatgg
actgctgagaaaccacatccacaagaagagtatttagattgcctgtgggcccagattcag
aaattgaaaaaggatcgctggcaggagcggcacatcctcagaccttatcttgcctttgac
agcatcctgtgcgaagccctgcagcacaatctgcccccgtttacaccacctccccacacc
gaggactccgtgtacccgatgccgagggtcatcttcagaatgtttgattacacggatgat
cccgagggtcctgtaatgccagggagtcattcagtggaaagattcgtaatagaggagaac
cttcactgcatcataaagtcccactggaaggaaaggaagacttgtgctgcacagctagtg
agctatccagggaagaacaagatcccattgaactaccacatagttgaggtgatttttgca
gagctgttccaacttccagcaccccctcacatcgatgtgatgtacacaacacttctcatt
gaactgtgcaaacttcagcctggctctctaccccaagttcttgcacaggcaacggaaatg
ttatacatgcgtttggacacgatgaatactacctgcgtagacaggtttattaattggttt
tcccatcatctaagtaacttccagtttcgttggagctgggaagattggtcagattgtctt
actcaagatcctgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatg
aggttgtcttaccatcagcgtatattagatattgttcctcctaccttctcagctctatgt
cctgcaaacccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctgga
cattcagttgctctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatc
ttcagcattctgaaagatgtgccaaatcctaaccaggatgatgatgacgatgaagggttc
agctttaacccgttgaaaatagaggtctttgtacagactctgctgcacttggcagccaaa
tcgttcagccactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctggct
gaaagtgatgaaggaaagttacatgttctgagagtcatgtttgaggtctggaggaaccat
ccacagatgattgctgtactggtagataagatgattcggacacagattgttgactgtgct
gcagtagcaacttggattttctcttcagaactgtctcgtgactttactagattgtttgtt
tgggaaatcctgcactccacaattcgtaagatgaacaaacacgttctgaagatccagaaa
gagctagaagaagctaaagaaaaacttgcaaggcaacacaaacgacgaagtgatgatgat
gacagaagcagtgacagaaaagatggggctcttgaggagcaaatagaaagactgcaggag
aaggtggaatctgctcagagtgaacagaagaacctcttccttgtcatattccagcgcttt
atcatgatcttgaccgagcacttagtgcgatgtgaaagcgacgggaccagcgtgttaaca
ccgtggtacaagaactgtgtagagaggctccagcagattttcttacagcatcaccagata
atccagcagtacatggtgaccctggagaacctgctcttcactgccgagttagaccctcat
atcctggctgtgttccagcagttctgtgccctgcaggcctaa
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