Equus caballus (horse): 100064920
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Entry
100064920 CDS
T01058
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ecb
Equus caballus (horse)
Pathway
ecb04136
Autophagy - other
ecb04140
Autophagy - animal
ecb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100064920 (ATG16L1)
04136 Autophagy - other
100064920 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100064920 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100064920 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
ecb03029
]
100064920 (ATG16L1)
Membrane trafficking [BR:
ecb04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100064920 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
100064920 (ATG16L1)
Mitochondrial biogenesis [BR:
ecb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100064920 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
Arrestin_N
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Arrestin_C
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_RFWD3
NBCH_WD40
CCDC93_CC
Beta-prop_IFT122_1st
eIF2A
Transglut_C
Fez1
DUF2079
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
100064920
NCBI-ProteinID:
XP_014595886
LinkDB
All DBs
Position
6:20082197..20158142
Genome browser
AA seq
1011 aa
AA seq
DB search
MSSGLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQADK
HDTPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLEKANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETTDHAEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
RRRSVSSFPAPQDNVDAHPASSKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVSGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVR
QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSADGSLYVWSVLSGKVEKVLSKQHGWKTLRG
TANMAASMKTSRATPNRVIFKKTSRDKSVTIYLGKRDYIDHVDQVEPVDGVVFVDPELVK
GKKVYVSLTCAFRYGQEDIDVMGLTFRRDLYFSRVQAFPPVGAAGTHTKLQESLIKKLGG
NTYPFLLTFPDYLPCSVMLQPAPQDTGKSCGVDFEVKAFATDSTDGEEDKTPKKSSVSLL
IRKVQHAPPKMGPQPRAEAAWQFFMSDKPLHLAVSLSKEIYFHGEPIPVTVTVTNNTEKT
VKKIKALVEQVANVVLYSSDYYVKPVATEETQEKVPPNSTLTTTLTLVPLLANNRERRGI
ALDGKIKHEDTNLASSTIVKEGIDRTVMGILVSYQIKVKLMVSGFLGELTSSEVATEVPF
RLMHPQPEDPATAKESCQDENLVFEEFARQNLKDAGEMEERKKHQAAAVDE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgactttccccgctggaagcgccacatcgcggaggag
ctgaggcggcgggaccggctgcagaggcaggcgttcgaagagatcatcctgcagtataac
aagttgctggagaagtcagatcttcattcagtgctggcccataagctacaagctgacaag
catgacacaccaaacaggcatgagataagtcctggacatgacggtgcgtggaatgatagt
cagctacaggaaatggcccagctgaggattaaacaccaggaagaactgactgaattacac
aagaaacgtggagagttagctcagttggtgattgacctgaataaccaaatgcagcagaag
gaccgggagatgcagatgaatgaagcaaaaattgcagaatgcttgcagaccatctctgac
ctagagacagagtgccaagaactgcgcagtaagctgcaggaccttgagaaagccaatcag
accctgaaggatgaatatgatgccctgcagatcacttttacggccttggaggagaaactg
aggaaaaccactgaggagaaccaggagctggtcacccgatggatggccgagaaagcccag
gaagccaaccgcctaaatgcagagaatgagaaggattcaaggaggcgccaagcccggcta
cagaaagagcttgcagaagcagcaaaggaacctctaccagttgaacaggatgacgacatt
gaagtcatcgtggatgaaaccaccgatcatgcagaggagacctctcccgtgcgagccatc
agcagggcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttcttctgatgctgcc
aggaggcgctctgtctcttcctttccagcaccccaggataacgtggatgctcatcctgct
tctagtaaagaagtgagggtgccaacgactgcattgtgcgtctttgatgctcacgacggg
gaggtgaacgctgtgcagttcagtccaggttcccggctgctggccacaggaggcatggat
cggagggttaagctttgggaagtgtctggagacaaatgtgaattcaagggttccctctcc
ggcagcaacgcaggcattacaagcattgaatttgacagtgctggatcttacctcttagca
gcttcaaatgattttgcaagccgaatctggactgtggatgattatcggttgcggcacaca
ctcaccggacacagcggcaaagtgctgtcggccaagttcctgctggacaatgcgcgcatt
gtttctggaagtcatgaccggaccctcaaactctgggatctacgcagcaaagtctgcata
aagaccgtgtttgcaggatccagctgcaatgatatagtctgcacggagcagtgtgtaatg
agtggacattttgacaagaaaattcgtttctgggacatccgatcagagagtgttgtccga
gagatggagctgctggggaagatcactgccctggacttgaacccagaaaggactgagctc
ctcagctgctcccgtgacgacctgctgaaaattatcgacctgcggataaacgcggtcagg
cagacctttagcgcgcctgggttcaagtgcggctctgactggacgagagttgtgttcagc
cctgatggcagttacgtggcagcaggctcggccgacggctctctctacgtttggagtgtg
ctctcagggaaagtggagaaggtcctttcgaagcagcacgggtggaagacgctgcgaggg
acagctaacatggcagccagcatgaagaccagtagggctacaccaaaccgtgttatcttc
aagaagacgtcccgggacaagtcggtgaccatctacctggggaagagagactatatagac
catgtggaccaagtagagcctgtggatggtgtcgtctttgtggatcctgagctggtgaag
ggaaagaaagtgtacgtgtctctgacctgcgccttccgctacggccaggaagacatcgac
gtgatgggcctgaccttccgcagggacctgtacttctctcgggtccaggcgttccctcct
gtgggggccgcgggcacccacacaaaactgcaggaaagcctgatcaagaagctggggggc
aacacataccccttcctgctcacgtttcctgactacttaccctgctccgtgatgttacag
ccagctccacaggataccgggaagagctgtggtgttgacttcgaggtcaaagcgtttgcc
acagacagcacagatggcgaagaggacaaaactcccaagaagagctccgtgagtttactg
atccgtaaagtacagcatgcgccccccaagatgggtccccagccccgagcagaggccgcc
tggcagttcttcatgtccgacaaacccctgcacctggcagtctccctcagcaaagagatc
tatttccacggggaacccattcctgtgaccgtgacggtgaccaataacacagagaagaca
gtgaagaagattaaagcattagtggaacaagtggccaatgtggttctctactcgagtgat
tattacgtcaagccggtggccacggaggaaacacaagaaaaagtgccaccaaacagcact
ttgaccacgacgctgacgctggtgcccttgcttgcaaacaaccgagaaaggaggggcatt
gccctggacgggaaaatcaagcatgaggacacgaatcttgcttccagtaccatcgtcaag
gagggcatagaccggaccgtcatggggatcctggtgtcctaccagatcaaggtgaagctc
atggtgtcaggctttctgggagagctcacctccagtgaagtggccactgaggtgccgttc
cgcctcatgcacccccagcctgaggacccagctacggcaaaggaaagttgtcaagatgaa
aatttggtttttgaagagtttgctcgccaaaatctgaaagacgcaggagaaatggaggaa
aggaagaaacaccaggcggcagccgtggatgagtga
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integrated database retrieval system
