Equus caballus (horse): 100064940
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Entry
100064940 CDS
T01058
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecb03037
]
100064940 (NPHP3)
Cilium and associated proteins [BR:
ecb03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100064940 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_3
TPR_11
AAA_16
NACHT
KAP_NTPase
AAA_22
AAA_19
AAA_14
T2SSE
Viral_helicase1
FliD_C
Motif
Other DBs
NCBI-GeneID:
100064940
NCBI-ProteinID:
XP_023476702
Ensembl:
ENSECAG00000007467
VGNC:
20837
LinkDB
All DBs
Position
16:complement(70022248..70063403)
Genome browser
AA seq
1346 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRGAGAAAGAGPGSL
PRGTGGGGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKLD
TENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKE
NEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAAGTQCEYWTGGALGSE
PSIGSMIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDIAVASLLQVTPLFSHSLWSNTV
RCYLIYTDETQPEMDLFLKDYSPKLKRMCETMGYFFHAVHFPIDVENQYLTVRKWEIEKS
SLVILFIHLTLPSLLLEDCEEAFLKNPEGKPRLIYHRLEDGKVTSDSVQQLIDQVSNLNK
TNKAKIIDHSGDPAEGVYKTYIYVEKIIKQDILGFENTDLETKDLGSEDSLPEEDDFGDV
LWDIHDEQEQMETFQQASNSAHELGFEKYYQRLNDLVAAPAPTPPLLVSGGPGSGKSLLL
SKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSTLTLDPAKLL
EEFPRWLEKLSARHQGSVIIIIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPPA
WRLWPTLHLDPLNPKDAKSIIIAECHSVDIKLSKEQEKKLERHCRSAATCNALYVTLFGK
MIARAGRASNLDKILHQCFQCQDTVSLYRLVLRSIQESMANDMDKELMKQILCLVNVSHN
GVSESELMELYPEMTWAVLTSLIHSLHKMCLLTYGCGLLKFQHLQAWETVRLEYLEGTTI
IPSYRQKLINYFTVQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQNLYKRGH
FAELLSYWQFVGKDKSAMAAEYFDSLKQYEKNCEGEENMICLADLYETLGRFLKDLGLLS
QAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYG
ADHPQIARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFALLRRRALQL
EELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNN
LAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPLY
ELAVEIRQKSFGPKHPSVATALVNLAVLHSQMKKHIEALPLYERALKIYEDSLGRMHPRV
GETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSRHSSSGDTFSLKTTNS
PNVFLHQGQSVKYLKQEILHWHYKAG
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgtcgtcgctcgtgagccccgcaggcggggaggtgatcgaggacacgtac
ggggcgggcggcggcgaggcctgcgagatcccggtggaggtgaagcccaaggcccgcctg
ctgcgcagctccttccgccggggcgcgggagcggcggcgggggccgggcccgggtcgctg
ccccgcgggacgggcggcggcgggctgctgggggccagcttcaagtccaccggctcgtcg
gtgcccgagctggagtacgcggcggccgagtacgagcggctgaagaaggagtacgagatc
ttccgggtcagcaagaaccaggagttgttgtccatgggccgccgcgaggccaagctggac
acggagaacaagcggctgcgggccgagctgcaggcacttcaaaaaacttatcagaagata
cttcgcgaaaaggaaagtgctttagaagcaaaataccaagcaatggagagagcagctaca
tttgaacatgacagagataaagttaaaaggcaattcaagatttttagggagaccaaggaa
aatgaaattcaggacttattgagggccaagcgagagttggagagcaagcttcagaggcta
caggctcaggggatccaagtgtttgatcctggggagtctgattccgatgacaactgcacg
gatgttactgctgctggaacccagtgtgaatactggactggcggagccttgggaagtgag
ccgtccatagggagtatgatccagcttcagcagtccttcaggggccctgagttcgcccat
agttctatagacgtggaaggaccctttgcaaacgtcaacagagatgactgggatattgct
gtggctagtttattacaggttactcccctgttttcacattctctatggagtaacactgtc
agatgttacctcatttatacagatgaaacccagcccgaaatggatcttttccttaaggac
tattcacctaaacttaaaagaatgtgtgagacaatgggatactttttccatgctgtgcat
tttccaatagatgttgaaaatcagtacctcactgtaagaaaatgggaaattgagaagagc
tcattagttatcttattcattcatttaactttaccaagccttttattggaagactgtgaa
gaagcttttctgaaaaaccctgaaggcaaaccgcgattaatttatcatcgtttggaggat
gggaaagtcacttctgactctgtccagcaattgattgatcaagtttctaacctgaacaag
accaacaaagccaagatcattgatcactcaggagatcctgcagagggagtatataaaact
tatatttatgtggaaaagattattaaacaggacatcctcggctttgagaacacagacctg
gagactaaggatttgggcagtgaagattctcttccagaagaagatgattttggtgatgtt
ctgtgggacatacatgatgagcaagagcaaatggaaacttttcaacaggcttcaaattca
gcccatgagttgggatttgagaaatattaccaacgccttaatgatctagtggcggcacca
gcaccgactccaccccttcttgtatctggaggaccaggttctggaaaatcccttctttta
tcaaagtggattcaattacaacagaagaattcccctaacacgctaattctttctcatttt
gtggggaggcccatgtcaaccagctcagagtcttccttgattattaaacgattaactcta
aagttgatgcagcactcttggtcagtttccactctgacactggatcccgccaagcttctg
gaagaatttccacgttggctagaaaagctctctgcccgtcatcaaggcagcgtcatcatc
attatcgattctatagatcaagttcagcaagttgaaaaacacatgaaatggctgatagat
ccgctgccagtgaacgtcagagtaattgtttctgtgaatgtggaaacatgccctccagca
tggaggttgtggcctacacttcatcttgatcctttaaatccaaaagatgcaaaatctatc
ataattgcagaatgccactctgtagacattaaattaagtaaagagcaggagaagaagcta
gaacgacattgtcgttctgctgcaacctgtaatgccctttatgtcacccttttcggcaaa
atgatcgcgcgtgctggcagagcaagcaatttagataaaatccttcatcagtgtttccag
tgtcaagatactgtctcattatatagacttgttctgcgatctatccaggagtccatggca
aatgatatggataaagaactaatgaaacagattctctgcctcgtaaatgttagtcacaat
ggtgtgagtgagtcagaactgatggaactctatcctgagatgacctgggctgtcttgacc
tcccttattcacagtttacacaaaatgtgtttgttgacatatggttgtggcctgctcaag
tttcaacatctacaggcttgggaaacagtgaggctggagtacctggaaggtaccaccatc
attccttcttataggcagaagctaatcaactatttcactgtgcagctaagtcaggaccgc
gtgacctggaggagtgcggatgagctcccgtggctgtttcagcagcagggaagtaaacag
aagttgcacgattgccttctcaatctctttgtgtctcaaaacctttataaaagaggacac
tttgccgagttgctgagttactggcagtttgttggcaaagacaaaagcgcgatggcagca
gagtactttgattccttgaagcagtatgagaaaaactgtgaaggcgaggagaacatgatt
tgcttagcagacctttatgaaaccctggggcgatttctcaaggatctaggccttctcagt
caggctgtggtgcctttgcagaggtctctagaaattcgggaaacagctttagatccagat
cacccaagagtagctcagtccctccaccagctagcaagtgtgtacgtgcagtggaagaag
tttggcaatgcagaacaactgtataaacaggcattggaaatctcagaaaacgcctacggt
gcagaccatccacagattgctcgtgaacttgaggcacttgcaactttgtaccagaaacaa
aataagtatgaacaagctgaacattttaggaaaaaatcctttaaaattcgtcagaaagct
acaaggagaaaaggcaacttgtatggatttgcccttttacgtagacgggccctgcagtta
gaagagctgacgttaggtaaggacacacctgacaatgctcggactctcaatgaactgggc
gttctctactatctgcagaataacctagaaacagctgaccagtttctgaagcgttcctta
gaaatgagggagcgagttctaggaccagatcaccctgactgtgcccagtctttgaataat
ctggcggctctatgcaatgaaaagaaacagtatgataaagcggaagaactttatgaaaga
gcgttagacattcggaggcgagcattagctcctgatcacccttctttggcttatacagtg
aagcatcttgcaatcttatataagaaaatggggaaacttgacaaagctgtacctttgtat
gagctggctgttgaaattcggcagaaatcctttggcccaaagcaccctagcgtagcaact
gccttggtgaacctagctgttctccacagccaaatgaaaaaacacattgaagctttgcca
ttatatgaaagagcattaaagatttacgaagacagcctgggtcggatgcatcctcgagtt
ggagaaacattaaaaaatttagctgtgcttagctatgaagaaggggattttgaaaaagct
gctgaactatacaaaagggcaatggaaataaaagaagcagaaacgtcacttttgggtgga
aaagctccttcccgacactcgtcaagtggagatacatttagcttaaaaacaaccaattct
cctaatgttttccttcatcaaggacaaagtgtaaagtatctgaaacaggaaatactgcat
tggcattataaagcaggatga
DBGET
integrated database retrieval system
