Equus caballus (horse): 100064997
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Entry
100064997 CDS
T01058
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100064997 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100064997 (EXOSC5)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100064997 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100064997
NCBI-ProteinID:
XP_001500390
Ensembl:
ENSECAG00000024210
VGNC:
17735
UniProt:
A0A9L0RDM0
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Position
10:complement(12058082..12066540)
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AA seq
263 aa
AA seq
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MRTQYAANTQARAFGRKRWSLLHVGSGVMEGAMRSDAKIRGESGTESSPRGPGCSLRHFA
CEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEK
SRERLIRNTCEAVVLGTLHPRTSITVVLQVISDAGSLLACCLNAACMALVDAGVPMRSLF
CGVTCALDSDGTLMLDPTAKQEKEARAVLTFALDSVERKLLMSTTKGLYSDAELQQCLAA
AQAASQHVFRFYRESLQRRYSKS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactcaatacgcagccaacacgcaagcgcgcgctttcgggcggaagcggtggtcg
ctgctacacgtgggatccggagtcatggagggtgcgatgcggtctgacgccaagattcgc
ggtgagtctggaacagaatccagccctcggggccccggctgcagcctccggcactttgct
tgcgaacagaacctactgtcccggccggatggttctgcttctttcctgcaaggggacacc
tccgtcctggcaggcgtgtacgggccggctgaggtgaaggtcagcaaagagatcttcaac
aaggccacgctggaagtgatcctgaggccgaagatcgggctgcctggcgtagcggagaag
agccgggagcggctgattaggaacacgtgtgaagcggtggtgctggggacgctgcacccc
cgcacctccatcaccgtggtactgcaggtcatcagcgatgctggctctctcctggcctgt
tgcctgaatgccgcctgcatggcattggtggacgcaggtgtgcccatgcggtcccttttc
tgtggggtcacctgtgccctggactctgatgggaccctcatgctggaccccacggccaag
caggaaaaggaggcccgagcagtcctgacctttgcgcttgacagcgtggaacggaagctg
ctgatgtccaccaccaaggggctctactccgatgctgagctccagcagtgcctggctgca
gcccaggccgcctcgcaacatgtcttccgcttctaccgggaatcgctacagaggcgttac
tccaagagctga
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integrated database retrieval system
