Equus caballus (horse): 100065026
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Entry
100065026 CDS
T01058
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100065026 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100065026 (CNOT4)
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100065026 (CNOT4)
04121 Ubiquitin system [BR:
ecb04121
]
100065026 (CNOT4)
Enzymes [BR:
ecb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100065026 (CNOT4)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100065026 (CNOT4)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100065026 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100065026 (CNOT4)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100065026 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Rtf2
DZR_2
Nup35_RRM_2
Torus
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100065026
NCBI-ProteinID:
XP_023495513
Ensembl:
ENSECAG00000020262
VGNC:
16677
UniProt:
F7DZW7
LinkDB
All DBs
Position
4:complement(89667033..89804801)
Genome browser
AA seq
713 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVLPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNSSSHTTTTKGPGSGFLHPAAPANANSLNSTFSVLPQRFPQFQ
QHRAVYNSFNFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
IADNSSSVESLNVKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSW
DGPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPF
STQIPLHRAGWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgcgaaggaagaccctgtggaatgtcctctttgcatggagccg
ttggagatagatgatatcaactttttcccttgcacctgtggctaccagatttgccgattt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgtagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagaactgcaaaggataaagaat
gagaaaaaacagaaacaaaatgagagaaaacagaaaatatcagaaaatcgcaaacatttg
gctagtgtacgggttgtacagaaaaacctcgtctttgttgtaggtctgtctcagcgccta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcataaataatagcacatcatatgcaggctcacagggtccaagtgccagtgcttat
gtaacctatatccggtcagaagatgctctcagagccatacagtgtgtcaacaatgtggtg
gtagatggcagaacacttaaggcatctctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaaacctgactgcatgtatctacacgaattgggggatgaggca
gccagcttcacaaaagaggaaatgcaggcgggtaaacaccaagagtatgaacagaagcta
cttcaagaattatataaattaaaccccaattttcttcaactatctacgggttcagttgat
aagaataagaacaaagtgacgccactgcagaggtatgatacccccatcgacaaaccttca
gattctctcagtataggcaatggtgataattcccagcagatatctaacagtgatacgccc
tcaccaccacctggtttatccaaatccaatccagtcctccccatcagttcatccaatcac
agtgcacggtctccttttgaaggggcagtaactgagtcacagtcgttattctcagacaac
ttccgccatcccaacccgatccccagtgggcttcctcctttccccagctccccacagaca
tccagtgactggcctacagcaccagagccgcagagcctcttcacatcggaaacaatccca
gtatcatcctctacagactggcaagcagcgtttggctttggttcttctaaacaaccagag
gatgacttgggttttgatccctttgatgtcactcgaaaagccttagcagacctgattgaa
aaggaactatcagtccaagaccagccttccctttcgcccacatctcttcagaactcctct
tcacacactacaaccaccaaaggtccgggctctggattcctgcatcccgctgcacctgca
aatgccaactctctcaatagtaccttttcagtcttgccacaaaggttccctcaatttcag
cagcaccgagcagtttataattcattcaatttcccaggccaggcagcccgctatccttgg
atggcctttccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaat
agtaatttcttggacttgaatctcccgccacagcacaacacaggtctgggagggattcct
atagcagacaacagcagttctgtagagagtttaaatgtgaaggaatggcaggacgggcta
agggcacttctacccaacattaacatcaactttggtggactgcccaattcctcctccccc
tccaacgccaaccacagtgcaccaacgtccaacactgccaccaccgacagcctgagttgg
gacggccctggcagctggacagacccagccatcatcacaggtattccagcatcttcagga
aacagtttagactctcttcaagatgacaatcctccgcactggctaaaatcccttcaggcc
ctcacagagatggacggccccagtgctgctccatcccaaacccaccacagcgcccccttc
agcacacagatccctctgcacagagccggttggaatccctaccctcctccttcaaatcct
tccagcttccactccccacccccaggctttcagacagccttcagaccccccagcaaaacc
cccacagatttgctacagagttcaacactggaccgccattag
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