Equus caballus (horse): 100065107
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Entry
100065107 CDS
T01058
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
ecb
Equus caballus (horse)
Pathway
ecb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100065107 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100065107 (YBX3)
03041 Spliceosome [BR:
ecb03041
]
100065107 (YBX3)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
100065107 (YBX3)
Spliceosome [BR:
ecb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100065107 (YBX3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Motif
Other DBs
NCBI-GeneID:
100065107
NCBI-ProteinID:
XP_023498894
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All DBs
Position
6:complement(39721320..39745557)
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AA seq
368 aa
AA seq
DB search
MSEAGEATTTTTTLPQAPAEAAPAAPQDPAPKSPGGSGAPQAAAPAPGALVAGNPGGDAA
PAATGTAAPASSAPAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTA
IKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYY
GRRRGPPRNYAGEEEEEGSGSSEGFEPPATDGQFSGARSQLRRPQYRPQYRRRFPPYHVG
QTFDRRSRVFPHPNRMQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRRGPPRPRPAPA
VGEAEDKENQQAANGPNQPSARRGYRRPYNYRRRPRPPNAPSQDGKETKAGEAPSENPAP
ATGQSSAE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgggcgaggccaccaccaccaccaccaccctcccgcaggctccggcggag
gcggcccccgcggccccccaggaccccgcgcccaagagcccggggggcagcggcgcgccc
caggccgccgccccggcgcccggcgccctggtcgcaggaaaccccggtggggacgcggcc
cccgcagccacgggcaccgcggcccccgcctcttcagcccccgctggcagcgaagacgcg
gagaagaaagttctcgccaccaaagtccttggcactgtcaaatggttcaacgtcagaaat
ggatatggatttataaatcgaaatgacaccaaagaagatgtatttgtacatcagactgcc
atcaagaagaataacccacggaaatatctgcgcagtgtaggagatggagaaactgtagag
tttgatgtggttgaaggagagaagggtgcagaagcagccaatgtgactggcccggatgga
gttcctgtagaagggagccgttatgctgctgatcggcgccgttacagacgtggctactat
ggcagacgccgtggacctccccgtaattacgctggggaggaggaggaggaagggagcggc
agcagtgaaggatttgagccccctgccactgacgggcagttctctggggcccggagtcag
ctgcgccgcccccagtatcgccctcagtaccggcggcggttcccgccttaccacgtggga
cagacctttgaccgtcgctcacgggtctttccccatcccaacagaatgcaggctggtgag
ataggagaaatgaaggatggagtccccgagggagcacaacttcagggaccggttcatcga
aatccaacttaccgcccaaggtaccgtaggggccctcctcgcccacgacctgccccggct
gtcggagaggctgaagataaagagaatcaacaagcggccaatggtccaaaccagccatct
gctcgccgtgggtaccggcgcccatacaactatcggcgtcgcccccgtcctcctaatgct
ccttcacaagatggcaaagagaccaaggcaggtgaagcaccatctgagaaccctgctcca
gccaccgggcagagcagtgctgagtaa
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integrated database retrieval system
