Equus caballus (horse): 100065406
Help
Entry
100065406 CDS
T01058
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ecb
Equus caballus (horse)
Pathway
ecb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100065406 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100065406 (TAF5L)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100065406 (TAF5L)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100065406 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
100065406 (TAF5L)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100065406 (TAF5L)
STAGA complex
100065406 (TAF5L)
TFTC complex
100065406 (TAF5L)
SAGA complex
100065406 (TAF5L)
SLIK complex
100065406 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
eIF2A
Ge1_WD40
WD_LRWD1
Nbas_N
Mala_s_1-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
100065406
NCBI-ProteinID:
XP_001497633
Ensembl:
ENSECAG00000016369
VGNC:
23854
LinkDB
All DBs
Position
1:68795913..68829076
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSEGNGLEGTDMPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCSAPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcaccgagcagattcagatggctgtgtcctgctacctcaaacgccgg
cagtacgtggactcagatggtcccctgaagcaaggactgcggctgtcacagactgctgag
gagatggcagccaatctcacagtccagtcagaatctgggtgcgccaacatagtgtctgca
gccccatgccaggcagagccccagcaatatgaagtacagtttggacgactacggaatttt
ctgaccgattctgattcccagcatagccatgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaagaagacagctacaactaccttatccgctacctccaa
agtgacaacaacacagccctgtgcaaagtcctcaccttgcatatccatcttgatgtgcag
cctgccaagagaacagactaccaactctatgccagtggcagctcctcaagaagtgagggc
aatggcttagaaggcactgacatgcctgcccctattctgcagaacgaggctgccctggag
gtcttgcaggagagcattaagcgggtcaaggatggccccccctccctcactaccatctgt
ttctatgccttctataacacagagcagcttttgaacactgcagaaatctccccagatagc
aagctgcttgctgctgggtttgacaactcctgtataaaactgtggagtttacgatccaag
aagttaaaatcagaaccccatcaagtagacgtgtcccgcatccacttggcttgtgatatt
ctggaagaggaggatgatgaggatgataacgcaggcacagagatgaagatactgagggga
cactgtggaccagtgtacagcacaaggttcctcgcagacagctcagggttgctctcttgt
tccgaagacatgtccattaggtactgggacctcggaagtttcaccaacactgtgttgtac
caaggacatgcctatcctgtgtgggacctggacataagcccatatagcctgtactttgcc
agcgggtcccatgaccgcactgcaaggctgtggtcatttgatcggacgtacccactgaga
atatatgcaggacacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttagctacaggctcaaccgacaagactgtccggctgtggagtgctcagcaggggaactcc
gtgaggctcttcacaggccaccgtggccctgtgctttctcttgccttttctccaaacggt
aagtacttggcatcagctggcgaggaccagcgtttgaagctatgggacttggcttctggg
accctttataaagaattaagaggccatacggacaatatcaccagcctcaccttcagtcct
gacagtagtttgattgcctctgcatccatggacaactctgtgcgagtctgggacattagg
aacacttactgcagtgcacctgctgatggctcctccggtgaactcgtgggtgtatacacc
gggcagatgagcaatgtactgagtgtgcagttcatggcctgtaaccttcttctagtgact
ggaatcacacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
