Equus caballus (horse): 100065649
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Entry
100065649 CDS
T01058
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecb03009
]
100065649 (LTN1)
04121 Ubiquitin system [BR:
ecb04121
]
100065649 (LTN1)
Enzymes [BR:
ecb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100065649 (LTN1)
Ribosome biogenesis [BR:
ecb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100065649 (LTN1)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100065649 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
zf-RING-like
HipN
Motif
Other DBs
NCBI-GeneID:
100065649
NCBI-ProteinID:
XP_001915227
Ensembl:
ENSECAG00000010824
VGNC:
19836
LinkDB
All DBs
Position
26:complement(26806603..26862159)
Genome browser
AA seq
1766 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGIMCTERDTEIVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKHLAPYLKSLMGYWLMAQCDTYTPAASAAKDAFEAAFPPSKQP
EAIAFCKDEITIVLQDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKKLLCLLP
DNELDSLEEKFKSLLSQNKFWKYGKHSIPQIRSAYFELVSALCLRIPQLMKDEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSAVVREGGRGLATVIY
PYLLPFISKLPQSITDPKLDFFKNFLTSLIVGLSTERIKTSFSECSAVISAFFECLRFIM
QQNLGEKEIEEMLVNDQLIPFIDAVLKDPKLQDGQLFNHLAETLNSWEAKADMEKDDKTV
HNLEKVLLNFWERLSEICVEKINEPEADLKSVLGVSNLLQVLQKPKSSLKSNKKKVSKVR
FADEMPESNKENEKCVSSEGENSEGSELVAELSLTHNCSDVISPLRKKPLEDLVCKLAEM
SINYVNEQKSEQHLRFLSTLLNSFSSTQVFKMLLGDEKQSVVKAKPPEITKLAQKNPAVQ
FLYQKLIGWLNEDPKKDAGFLVDILYSALRCCDNNMERKDVLDDLTKVDLNWNSVLQVIE
KACSSSDKHALVTPWLKGDILGEELVTLAEHLCNKHLESKGSSESYFSERWTLLSLVLSQ
HVKDDYLIGEVYVERIIVKLHETLSKTETLTEAENNDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTGSIYKQSTFLRLSA
LWLKNQVQSSSLDIKSLQVLLSTVDDLLNALVESEDTYLLGVYIGSVMPNNSEWEKMRQS
LPIQWLHRPLLEGRLSLNYECFKTDFKEQDTKKLPSHLCTSALLSKMILVALKKEIVLEN
NELEKIIAELLYSLQWCEELDNPPIFLTGFCEMLQKMNITYDNLCGLGNTSGLLQLLFNR
SRENGTLWSLIIAKLILSRSVSSDEVKRHYRRKECFFPLTEGNMHTIQSLCPFLSKEDKK
EFIAQCIPALLAWTKEDLCSTNGGFGHLAIFNSCLQTRSIDDEELLHGILKILISWKKDH
EDIFLFSCNLSEVSPEILGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSE
NQALYSVPLVQLFACVSCDLACKLSAFFDSTTLDTTGNLPVNLISEWKEFFSQGIHSLLL
PLLVNVTGESKDTSETSFHNAMLKPMCETLTYIPKDQLLSHKLPARLVAGQKTNLPEYLQ
TLLNTLVPLLLFRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSTQEDLLENVLGCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTYAETAIELSNKDPKTFFTEELQLSIRETATLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSNVLSFQEISSVQTSTQL
FNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcggaccaaggggaacctgaggccttcaaacagtggccgg
gctgcagaactccttgccaaagaacagggaacagtgcctggatttattggttttggaaca
tctcagagtgacctaggctatgttcctgccattcaaggagctgaagaaattgacagtctt
gtggattctgatttccgaatggtgctgcggaaactttctaagaaagatgtcacaacaaaa
ttaaaagctatgcaggaatttggaatcatgtgtacagagagagatacagaaattgtaaaa
ggagttctcccgtactggccaagaattttctgcaaaatttcacttgatcatgaccgccgg
gttcgagaagccacacaacaagcttttgaaaaacttatccttaaagtaaaaaaacacttg
gctccttatttgaaaagcttaatgggctattggctaatggctcagtgtgatacgtacaca
ccagctgcatctgcagcaaaagatgcctttgaagcagctttccctccaagcaagcaacct
gaagccatagcgttttgcaaggacgaaattacaatcgtgctgcaggatcatcttataaaa
gaaacgcctgatacactcagtgacccgcagactgttccagaggaagagagagaagctaaa
ttctatcgagttgtaacctgttccttattggctttaaagaaattgctgtgcctcttacct
gataatgagcttgactctctggaagagaaatttaagtctcttttatcacaaaataaattt
tggaagtatggaaaacacagtatacctcagatccgctcggcttattttgagttagtttct
gctttgtgcctgcgtattccacagttgatgaaagatgaagcatccaaagtgagcccatca
gttctacttagcattgatgacagtgaccccattgtatgcccagctctctgggaagctgtg
ctttatacacttacaactattgaggactgttggcttcatgtaaatgcaaaaaaaagtgtg
tttcccaagctgtcagctgtggttcgtgaaggtggtcggggtctggctactgtcatatat
ccttaccttctgccatttatcagcaagctccctcagtccattacagatccaaagttggat
ttcttcaaaaatttcctcacgtctttaattgtagggctatcaacagagagaatcaaaacc
agcttttcagagtgctcagcagtaatatctgctttttttgaatgcttacgttttataatg
caacaaaacttaggtgagaaagagattgaagagatgctcgtcaatgatcagttgattcct
tttattgatgcagttctcaaagacccaaaattgcaagatgggcagctctttaaccattta
gcagaaactttaaattcctgggaagccaaagctgatatggaaaaagatgataagacggtt
cacaacttggagaaagtgctactaaatttctgggaaagactgtcagagatctgtgtggag
aaaatcaatgagccagaagctgatcttaagtctgttttgggtgtatctaacctattacag
gtcctccagaagccaaagagctcattgaagtcaaataaaaaaaaagttagtaaggttaga
tttgctgatgagatgcctgaaagtaataaagagaatgaaaaatgtgtctcctcagaagga
gagaacagtgaaggctctgaattagtggctgaactgtctctcacacataattgttcagac
gttatatctccactaaggaaaaaacctttggaagacttagtctgtaagttagcagagatg
agtattaattatgtcaatgaacaaaagtcagagcagcatctaaggtttctttccactctg
ctcaactccttctcttcaacccaagtatttaaaatgctactaggtgatgaaaaacagagt
gttgtcaaagccaaacctcctgaaataaccaagcttgcacaaaaaaatcctgcggtgcag
tttttataccagaaactaataggttggctaaatgaagatccaaagaaggatgctggtttc
ttggtggacattttgtacagtgccctccgttgctgtgacaataatatggaaagaaaagat
gtcttggatgatctaaccaaggtggatctcaattggaattctgttcttcaggtcattgaa
aaggcatgttctagttcagataaacatgctttagtaactccttggctaaaaggagatatc
cttggagaggaattggtaaccttggcagagcatctgtgtaataagcacttggaatccaaa
ggatcttctgaatcttacttctcagaaagatggactcttctaagcttggtattatcccaa
catgtaaaagatgattacttgattggagaagtatatgttgaaagaattattgttaaactt
catgaaactttatccaaaacagagacattgacagaagctgaaaataatgactcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcaaaaggatgcttgctaatg
ccatcatctgaagatttattattaactctctttcagttatgtgctcagagcaaagaaaaa
acacatttgccagactttcttatctgtaaactgaaaaatacttggctctcgggtgtgaat
ttattggtccatcaaactggcagtatatataaacagagtaccttcctacgtttgtctgct
ctgtggctgaagaaccaagttcaatcttcatctttagatatcaaaagtcttcaagtcctc
ttgtctactgttgatgacttgctaaatgcacttgtggagagtgaagatacctatcttctg
ggagtttatattggaagtgtaatgccaaacaacagtgagtgggaaaagatgagacagtct
cttcctatacagtggttgcatagacctcttttagaaggaagattgagtttgaattatgag
tgtttcaaaacagattttaaagaacaagatacaaagaaacttcccagccatttgtgtact
tcagcattattgagcaaaatgatattagttgccctgaaaaaggaaatagtcctagaaaat
aatgagctagagaaaataattgcagaactgctgtattcactgcagtggtgtgaagaatta
gacaatccacctatttttctaactggattttgtgaaatgcttcaaaaaatgaatattacg
tatgataacttatgtggtcttggtaatacttctggccttttgcagctgttatttaacagg
tccagggaaaatggcaccctatggtctcttattattgctaagttgatcctttcccgaagt
gtttcatctgatgaagtaaaacggcattataggagaaaagaatgtttttttccactaaca
gaaggtaatatgcataccattcaaagtctctgtccgtttttgtcaaaagaagacaagaaa
gaattcattgctcaatgtatacctgcccttttggcctggactaaggaagatctttgcagt
actaatggaggttttggacatcttgccattttcaattcttgtctgcaaaccagaagcata
gatgatgaagagctattacatggtatattaaaaattctaatatcctggaagaaagatcat
gaagatatttttcttttcagttgtaatctatcagaagtaagtccagagatactgggtgta
aatatagaaataatccggttcctctccctgtttctgaaatactgctcgtctcctttagca
gagagtgagtgggacttcatcatgtgctccatgttggcttggctggagacaacaagcgag
aatcaagcgctgtattcggttccacttgtacaactgttcgcctgtgtcagctgtgatctg
gcctgcaagctcagtgctttttttgattccacaactctggataccactggcaaccttcct
gtaaatctaatcagtgaatggaaagaatttttttcccaaggcatccacagtttgctttta
cctcttttggtaaatgttacaggagaaagcaaagatacatctgaaacatcctttcacaat
gcaatgctgaagcccatgtgtgaaacattaacttatatcccaaaggatcagctgttgagt
cacaaactccctgcaagattggttgctggtcagaaaacaaacttgccagaatatctgcag
actttgttaaatacgttggtgccattactccttttcagagctcggcctgtgcaaattgct
gtttatcatatgctatacaagttgatgcctgaattaccacagtatgatcaggataatcta
aagtcatacggagatgaagaagaagaaccagccctgtcaccaccggcagcactgatgtct
cttcttagcacgcaagaggacttactagaaaatgttttggggtgtattcccgttggacag
atagttactattaagccactgagtgaagacttctgttatgttctgggatacctcctcact
tggaaattaatacttactttcttcaaagccgcttcatctcagcttcgggctctgtattcg
atgtaccttcggaaaacaaagagtttgaataaattgctctatcacctgttcaggcttatg
ccagaaaacccgacctatgcagagacagctattgagctttccaataaggaccctaagaca
ttctttactgaagagcttcagttgagtattagagaaacagcaactcttccataccatatt
ccccacttggcttgttcagtctatcatatgacattaaaggacttgcccgccatggttagg
ctgtggtggaatagtagtgagaagcgtgttttcaatattgtagatagatttacaagcaag
tatgtcagcaatgttctttctttccaagaaatatcttctgtgcaaacaagtacacaacta
tttaatggcatgacggttaaagctcgagccacaactcgagaagtcatggcgacttacacc
attgaggacatagtcattgaacttataatacagctgccctcaaattacccactggggtca
ataacagtggaaagtgggaaaagagtgggagtggctgttcagcagtggcggaattggatg
ctgcagttaagcacttatcttacccatcaaaatggaagtattatggaaggcttagcttta
tggaaaaataatgtagacaaacgttttgagggtgttgaagattgcatgatctgtttctcc
gtcattcatggtttcaactattctcttcctaaaaaagcctgtagaacgtgcaagaaaaag
ttccattcagcctgcttgtacaaatggtttacgtctagcaacaaatctacttgtccactc
tgtcgtgagacctttttctga
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integrated database retrieval system
