Equus caballus (horse): 100065738
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Entry
100065738 CDS
T01058
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100065738 (RNPS1)
03015 mRNA surveillance pathway
100065738 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100065738 (RNPS1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100065738 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100065738
NCBI-ProteinID:
XP_001498799
VGNC:
51226
UniProt:
F6U567
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All DBs
Position
13:41765406..41775336
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AA seq
305 aa
AA seq
DB search
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaataataaaaag
tccagcactagggctccttctcctaccaaacgcaaagaccgctctgatgagaagtccaag
gatcgctccaaagataaaggggccaccaaggagtcaagcgagaaggatcgtggcagggat
aaaactcgaaagaggcgcagcgcttccagtggtagcagcagcaccaggtctcggtccagc
tctacctccagctcgggctccagcaccagcacaggctcgagcagtggctccagctcctct
tcggcatcaagccgctcaggaagttccagcacatcccgcagctccagctccagcagctcc
tctggttctccaagtccttctcggcgccgacatgacaacaggcggcgttcccgctccaaa
tccaaaccacccaaaagagacgaaaaggaaaggaaaaggcggagcccttcccctaaaccc
accaaagtgcacatcgggagactcaccaggaatgtgaccaaggatcacatcatggagata
ttctctacttacgggaagattaaaatgattgacatgcctgtagaaaggatgcacccccac
ctgtctaaaggctatgcatacgtggagtttgagaatccagatgaagccgagaaggcgctg
aagcacatggacggaggacaaatcgatggccaggagatcactgccacagctgtgctggcc
ccctggcctaggccgcccccaaggcgtttcagccctcccaggagaatgctgccaccacct
cccatgtggcgccgatcacccccacggatgaggagaaggtcacgttccccgcggcgcagg
tcccccgtgcgccggcgctctcgctcccccggccgccgccgccacaggagccgttccagc
tccaactcctcccgataa
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