Equus caballus (horse): 100066148
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Entry
100066148 CDS
T01058
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04820
Cytoskeleton in muscle cells
ecb04926
Relaxin signaling pathway
ecb04933
AGE-RAGE signaling pathway in diabetic complications
ecb04974
Protein digestion and absorption
ecb05146
Amoebiasis
ecb05165
Human papillomavirus infection
ecb05200
Pathways in cancer
ecb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100066148 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100066148 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100066148 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100066148 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100066148 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
100066148 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100066148 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
100066148 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100066148 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100066148 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100066148 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100066148 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100066148 (COL4A1)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100066148 (COL4A1)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100066148 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100066148
NCBI-ProteinID:
XP_023477594
Ensembl:
ENSECAG00000019838
VGNC:
16738
LinkDB
All DBs
Position
17:complement(77436271..77582928)
Genome browser
AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFTGTPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGP
PGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPP
GVPGQAQVKEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS
TGFPGDSGYPGLPGREGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGFPGTPGLRGEPGP
KGFPGLQGQPGPPGFPVPGQPGAPGFPGERGEKGDQGFPGRSLPGPSGRDGLQGPPGPPG
PPGRPGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGESCLICDSTGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDIRLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI
GPPGPPGFGPIGPIGDKGQAGFPGSPGSPGLPGPKGEAGKVVPLPGPPGAEGLPGSPGFQ
GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGNPGRQGFSG
LPGSPGVPGQKGEPGIGLPGLKGSPGIPGIPGTPGEKGSIGGPGIPGEHGAIGPPGLQGI
RGDPGPPGLQGPKGAPGVPGIGPPGVMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGTQGLPGLTGQSGLPGLPGQQGTPGLPGFPGPKGEMGVMGTPGQPGSPGPAGVPG
LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQIG
PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVGGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPGTPGE
KGEKGSAGIPGMPGSPGPKGLPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGK
PGPSGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGTKGEKGSKGDVGFPGLAGSP
GIPGSKGEPGFLGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPMGPPGLPG
LDGLKGDKGNPGWPGAPGAPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGVKGDQGDQGFPGTKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLQGPPGPK
GQQGVTGLVGLPGPPGIPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctcctgctgctgcccgccgccctcctgctccatgag
gagcgcagccgggccgctgcgaagggtggttgtgctggctctggctgcggaaagtgtgac
tgtcatggagtgaagggacaaaagggtgaaagaggcctcccagggttacaaggtgtcatt
gggtttccgggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgac
actggagaaccaggactgccaggaacaaaagggacgagagggcccccaggagcatcgggt
taccctggaaacccaggacttcctggtattcctggccaagatggtcccccgggcccccca
ggtatcccaggatgcaatgggacaaagggtgagagaggacctctggggcctcccggtctg
cctggattcactgggactccgggaccaccagggttacctggaatgaagggggacccaggt
gagatactcggccacgtgcccgggaccctgttgaaaggggaaagaggattccctggaccc
ccaggaacaccaggttcgccaggattgccagggctgcaaggtcccgttggccctccagga
tttaccggaccaccaggtcctccaggccctcctggccctccgggtgaaaaggggcaaatg
ggcttaagttttcaaggaccaaaaggcgagaagggtgatcaaggggtcagtgggcctcca
ggagtgccaggacaagctcaagtcaaagaaaaaggagactttgccactaaaggagagaag
ggtcaaaaaggtgaacctggatttcagggaatgccaggggttggagagaaaggcgaacct
ggaaaaccggggccccgaggaaaacctggaaaagatggtgaaaaaggagaaaaagggagt
acagggtttcccggcgactcagggtacccaggactcccgggccgagagggttttaaggga
gacaaaggggaagcaggcccccccggcccgcctggaattgttattggcacaggaccattg
ggagaaaaaggagagcggggcttcccagggactccagggttgagaggagagccaggtccc
aagggtttcccaggattacaaggccagccaggccctccaggcttcccagtaccagggcag
cctggtgctcctggcttccctggagaaagaggagaaaaaggggaccaaggatttccaggc
cggtctttgccaggaccaagtggaagggatgggcttcagggtcctcctgggccccccgga
ccccctggacggccaggccacacgaatggaattgtggagtgccagcctggaccacccggg
gatcagggtcctcctggaattccggggcagccgggattgaccggggaagtcggagaaaaa
ggtcaaaaaggagagagttgcctcatctgtgactcaacaggacttcgtggccccccaggg
ccccagggaccccctggggaaataggtttcccaggacagccaggggccaagggcgacaga
ggcttacctggcagggatggtcttgaaggattgcctggcccacaaggtgcacccgggctg
atgggccagccaggagccaagggagagcctggtgagatttactttgacattcgactcaaa
ggtgacaaaggagacccaggttttccaggacaacccggtatgccaggcagagcaggatct
cccggaagagatggccatccaggtctgcccggccccaaaggctctccgggttcagtagga
ttaaaaggagaacgtggcccccctggaggcgttggatttcccggcagtcgtggtgacatt
ggccctcctgggcccccagggtttggccctattggccccattggtgacaaaggacaagcg
ggctttccgggaagccctggatcccccggcctgccaggtcccaagggtgaagcaggaaaa
gtcgtgcccttacctggtcctcctggagcagaaggacttccggggtccccaggtttccaa
ggcccccaaggtgaccgaggttttcctggaaccccaggaaggccgggcctcccaggagag
aagggtgctgttggccagcccgggattgggtttccaggccctcctggccccaaaggtgtt
gatggcttacctggagatgtgggacctcctgggaatccgggtcgccaaggatttagtggc
ctacctggctctccaggtgtgccaggccaaaagggagagcctggtataggtctgccagga
ctcaaaggatcgccaggtattcccggcattcctggcactcctggggagaagggaagcatc
gggggaccaggcattcccggagagcatggagctatcggccccccaggccttcagggaatc
agaggtgacccaggacctcctggattacaaggtcccaaaggagctccaggagttcccgga
ataggtccccccggagtgatgggtccccctggaggacaaggaccaccagggtcatcaggc
cctcccggagtgaaaggagagaagggtttccctggattcccaggcctggacatgccgggc
cccaaaggcgacaaagggactcagggtctgcccggcctcactgggcagtcggggctgcct
ggtcttcccggacagcaggggacgcccgggcttcccgggtttccaggtcccaagggagag
atgggcgtcatggggaccccggggcagcccggctcaccaggaccagcaggcgtgccagga
ttgccgggtgaaaaaggggaccacggcttcccaggctcctcgggacccaggggagaccct
ggcttcaagggcgataaaggagatgtcggcctccctggcaagcctgggtccatggataaa
gtggacatgggcagcatgaagggagagaagggagaccaaggagaaaaaggacaaattgga
ccaactggtgataaaggatcccggggagatcctggaaccccaggagttcctggaaaggac
ggccaagcaggacaccctgggcagccaggacctaaaggtgatccaggtgtaggtggaacc
ccgggtgctccgggccttcccggccccaaaggatcggtcggtggaatgggcctgccagga
acccctggagagaagggtgtgcctggaatccccggcccgcagggcgtccctggcttacct
ggagagaaaggagccaaaggagagaaagggcaggcgggtctccctggcattgggattccg
ggacggcccggggacaagggagaccaagggctggcaggctttccgggaactcctggagag
aagggcgagaagggaagtgctgggatcccgggcatgcccggctccccaggccccaaaggc
ctgccggggagcgtgggctatccaggaagccctgggttgcctggagaaaaaggtgataaa
ggcctcccagggttggacggcatccctggtatcaaaggagaagcaggtcttcctgggaag
cctggcccctcgggcccagccggccagaaaggggagcctggcagtgatggaatcccgggg
tcagcaggagagaagggtgaaccaggtctacccggaagaggattcccagggtttccaggg
accaaaggagagaaaggttcaaagggtgacgtgggtttcccaggattggctgggagtcca
ggaatacctggatccaaaggagagccggggttcttgggacctccggggccacaaggacag
ccaggattgcctggagctccgggccacgctgtggaggggcccaaaggagaccggggccca
cagggacaacctggcctgccaggccttccgggacccatggggccgccggggctccccggg
cttgatggactgaaaggtgacaaaggaaacccaggctggccgggggcgcctggtgcccca
gggcccaagggagacccagggttccagggcatgcctgggattggtggctctccaggaatc
acaggttctaagggtgacatgggccctccgggcgttccgggatttcaaggtcagaaaggt
ctccctggccttcaaggagttaaaggagaccaaggagaccaaggtttccctggaacgaaa
ggtcttccgggcccccccggccccccagggccttacgacatcatcaaaggggagccaggg
ctccctggtccagagggtcccgcaggtctgaaggggcttcagggacctccaggccccaag
ggacagcaaggtgtgacggggttggtgggcttacctggaccaccaggtatccccgggttt
gacggtgcccctggccagaagggagagacaggaccctttggacctcctggtccgagaggg
tttccgggcccgccaggccctgatggactgccaggatccatggggcccccgggcaccccg
tctgttgatcacggcttccttgtgaccaggcacagtcaaacaatagatgatccacagtgt
cctcctgggaccaaaatcctttaccacgggtactctctgctctacgtgcaaggcaacgag
cgggcccacgggcaggacttgggcacggctggaagctgcctgcgcaagttcagcaccatg
cccttcctcttctgcaacatcaacaacgtctgcaacttcgcctcccggaacgattactcc
tactggctgtccacccctgagcccatgcccatgtccatggcgcccatcactggggacaat
attaggccatttattagcaggtgtgcagtgtgtgaggcgccagccatggtgatggccgtg
cacagccagaccattcagatcccgcagtgccccagcggctggtcctcgctctggattggc
tattcctttgtgatgcacactagcgctggtgccgaaggttctggtcaagccctggcgtcc
cccggctcctgtctggaagagtttagaagtgcgcccttcatcgagtgccacggccgtggg
acttgtaattactatgcaaacgcttacagcttttggcttgctactatcgagaggagcgag
atgttcaagaagcccacgccatccaccttgaaggctggggagctgcgcacgcacgtcagt
cgctgccaagtctgtatgagaagaacataa
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