Equus caballus (horse): 100066250
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Entry
100066250 CDS
T01058
Symbol
ALS2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb05014
Amyotrophic lateral sclerosis
ecb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100066250 (ALS2)
05022 Pathways of neurodegeneration - multiple diseases
100066250 (ALS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100066250 (ALS2)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
100066250 (ALS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
RhoGEF
CCDC47
Motif
Other DBs
NCBI-GeneID:
100066250
NCBI-ProteinID:
XP_023478160
Ensembl:
ENSECAG00000009855
VGNC:
15268
LinkDB
All DBs
Position
18:complement(76806971..76879145)
Genome browser
AA seq
1657 aa
AA seq
DB search
MDAKKRSSIEAEGSKERGLVHVWQAGSCSVTPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEVCPSSPILENALVGQFVVTVATGSFHNGAVTESGVVYMWGENSA
GQCAIANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAENQANTAISPSTETVDSRGEVFENTLVENDLP
IATELNVGNVQTTSGDAISSQQDVMGTSEISSARNIPSYPDTQAVDEYVQKLSDRSIREN
SENSEKPMASQPLVKEAIPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKK
VMNFYSTAPCEPGAQAGGSSIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSR
RLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLG
HGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV
PRLAKVNGKNGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDPTEGDNLPENHSGTKTPV
LLSCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSDIKSQILRPL
LSLENLGTASTVQLLQEVASRFSKLCYLIGQHGASLSSFLQGIKEARSLVILKHASLFLD
SYTEYCTSITNFLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLP
IRQLHNYAKVLLKLATCFEVTSPEYQKLQDSSSCYESLAVHLGRKRKEAEYTLGFWKTFP
GKMTDSLRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLW
AEPLSEEAGGVNGLKITTPEEQFTLISSTPQEKTKWLRAVSQAVDQALRGTSDLPPYSSG
SSIQRQEPPISRSAKYTFYKDARLKDATYDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGL
EDGYGEYRIPNKALNKEDHYVGHWKEGKMCGQGVFSYASGEVFEGCFQDNMRHGHGLLRS
GKLTSSSPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEG
NFHLNKMMGNGVLLSEDDTIYEGEFSDDWTLNGKGTLTMPNGDYIEGYFSGEWGSGIKIT
GTYFKPSLYDSDKDRPKVFRKLGNLAVPADEKWKAVFDECWRQLGCENPGQGDVWKAWDN
IAVALTTSRRQHRDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPL
HPLGRLVETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRLFQLVRFLFPELPEEGSTI
PLSAPLPTERKSFCTGRSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDRE
EDIYWECVLRLNKQPDVALLGFLGVQRKFWPVSLSILGESKKILPTTKDACFASAIECLQ
QISTTFTPSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSE
VHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaagaagagaagctctatagaggcggaaggatccaaagaaagaggcctggtc
catgtctggcaggcaggatcctgttctgtaacaccagagagattgccaggctggggagga
aagactgttcttcaagcagcccttggagtgaaacatggagttcttctgactgaagatggt
gaagtctacagctttgggactcttccctggagaagtgaaccagcagaagtttgtccgagt
agccccattctagaaaatgccctggttgggcaatttgttgttactgtggcaacagggagt
ttccacaatggagcagtgacagaaagtggtgtagtgtacatgtggggggagaactctgct
ggccagtgtgcgatagctaaccagcagtatgttccagaaccgaatcctgtcagcatttct
gattctgagaccagtcctttgttagcagtcaggattttgcagttggcatgtggtgaggag
cacactctggcattatcaataagcagagagatttgggcatggggtactggttgtcagttg
ggtctcattaccactaccttcccagttacaaagccacaaaaggtggaacatcttgctggg
cgagtggtgctacaagttgcctgtggtgcgttccacagcttagcactcgtccaatgcctc
ccttcccaggatctgaagccagtcccagaaagatgcaaccagtgcagccagctcttaatt
actatgactgataaagaagaccatgtaattatatcagacagtcattgttgcccattaggt
gtgacactgtcagaatcccaggcagaaaaccaggccaacactgccatcagcccctccact
gaaaccgttgacagccggggagaggtatttgagaacactcttgtagaaaatgatctgccc
attgctactgaactgaatgttggaaatgttcagaccacgagtggtgatgccatttcctcc
caacaagacgtcatgggaacatctgaaatttcttctgccagaaatataccatcgtaccct
gacactcaggcagtggatgaatacgtgcagaagctgtcagatcgttcaataagggagaac
tcagagaacagtgaaaagccaatggcatctcagcctcttgtaaaagaagcaattcctaat
cttcacagtccaccgaccacaagcacctcagccctaaacagcctagtggtctcttgcgca
tctgctgttggtgtgagagtggctgctacgtatgaagctggggccttgtctcttaagaaa
gttatgaacttttatagtacagccccttgtgaacctggggctcaggcaggcggtagttcc
ataggcccggaaggtctgaaagatagccgagaagagcaggtgaaacaggaatcaatgcaa
ggaaagaaaagttcaagtcttgtagatatcagagaagaagaatcagagggaggcagccga
agactttccctccctggattgttgtcacaagtttcccccaggctcttaagaaaagctgca
cgggtgaaaacgcggacggtggttttgacccctacatacagtggagaagcagatgcactc
ctgccttccctgagaacagaggtgtggacctggggcaaagggaaggaagggcagctgggc
catggcgatgtgctgcctaggcttcagccattgtgtgtgaaatgtctggatggcaaagaa
gtaatccatctggaggcaggtggttaccattctcttgcacttactgcgaaatcccaggtt
tactcatggggtagcaatacctttggtcaacttgggcattccgattttccaacaacagtt
cctcgtcttgcaaaggtaaacggtaaaaatggagtctggagtgtagctgcaggccaggat
tattccctgtttttagtggatacagaagacttccagcctgggttatattatagtggccgt
caggaccctacagaaggtgacaaccttccagagaatcacagtggtactaagactccggta
cttctctcctgtagtaagcttggatatataagcagagtgacagcaggaaaagacagctat
ctagccttggtggacaaaaacattatgggatatattgccagcctccatgagttggctacc
acggaaagacggttctattcaaaactaagtgatatcaaatctcagattctcaggcctctt
ctcagtttagaaaatttgggcactgcgagtacagtccagctgttgcaggaggtggcaagc
cgatttagcaagctgtgttacctgatcggtcagcatggagcctccctgagcagcttcctt
caggggataaaggaagccaggagtttggtcatcctgaagcatgcaagtctcttcttggat
agttatacagagtattgcacatctattacaaatttcctggttatgggaggattccagctt
cttgctaagcctgccattgatttcctaaataaaaaccaggagctgttgcaagatttatca
gaagtgaatgatgaaaacacacagttgatggaaatactgaatactttgtttttcttgcca
atcagacaacttcataattatgcaaaagttttgctaaagcttgctacttgttttgaagtg
acatctccagaataccagaagctgcaggattccagttcttgttatgagtctcttgctgtc
catctcggcaggaaaaggaaggaagcagaatacacactgggcttctggaagacctttcct
ggaaaaatgacggattccttgaggaagccagagcgtcgactgctgtgtgagagcagtaat
cgagccctgtctctgcagcatgcagggaggttttctgtgaattggttcattctctttaat
gatgccctagtccatgcccagttctccacacaccatgttttccctttggccacactgtgg
gcagagccactttctgaagaagctggtggtgtgaatggcttaaagataactacacctgag
gagcagttcactctcatttcatcaacaccccaggaaaagactaaatggctccgggctgta
agccaagctgtggatcaggctttgagggggacatctgatcttccgccttatagtagtggc
agcagtattcagaggcaggaaccacccatttcacgcagtgccaaatatactttctacaag
gatgctcgcctaaaggatgccacctatgatggacgctggctttcagggaagcctcatggc
agaggggttttgaagtggccagatggaaagatgtattctggcatgttcaggaatggcttg
gaagatgggtatggagaatacagaatcccaaacaaagccttgaacaaagaagaccattat
gtgggccattggaaagaaggaaaaatgtgtggtcagggagtctttagttatgcctctggt
gaagtgtttgaaggttgttttcaagataacatgcgtcatggtcatggtctcctacgaagc
ggaaagttgacttcctcttctcccagtatgttcattggccaatgggtaatggacaagaaa
gcaggatatggtgtctttgatgatatcactagaggggaaaagtatatggggatgtggcaa
gatgatgtatgtcaagggaatggtgtggtagttacccagtttggattatactatgaaggc
aactttcaccttaataaaatgatgggaaatggggttttactgtccgaagatgatactatc
tatgagggagaattttcagatgactggactcttaatggaaagggaacactgactatgcca
aatggagattacattgaaggttatttcagtggagaatggggatcgggaataaaaatcact
ggaacctactttaagcctagtctgtatgacagtgataaagacagacccaaagttttcagg
aagctaggaaacctggctgtgccggctgatgagaagtggaaagcagtgtttgatgaatgt
tggcgtcagctgggctgtgagaacccaggccaaggggacgtttggaaagcatgggacaat
attgctgtggccctgaccaccagtcggcgccaacatagagacagtccagagatactaagt
cgttcgcagactcagacactagagagtttggaattcattcctcagcatgttggtgccttc
tctgtggagaaatatgatgacatcaagaaatatttgataaaggcctgtgacactcctctg
caccccctgggcaggctcgtggagacgctggttgccgtgtacagaatgacatatgttggg
gtgggagccaaccgccggttattgcaggaggctgtgaaggagattaagtcctacctgaag
cgacttttccagctggtgaggttcttatttcctgagcttcctgaagagggcagcacgatt
cctctctctgctcctctgccaactgaaaggaaatccttttgcactgggaggtcagattcc
agatccgaatcaccagagccaggttatgtggtaacaagttctggcttactgcttcctgtg
ttgctacctcggctctaccctcctctgtttatgctgtatgccctggacaacgatcgcgag
gaagacatttactgggaatgtgttctgcggctcaacaagcagccagatgttgctcttctg
ggcttccttggggtgcagaggaaattttggccagtgagcttgtcaatccttggagagagt
aaaaagattttgccaaccacaaaagatgcttgttttgcctcagccatagaatgtctacag
cagatcagcacaacatttaccccatcagacaaacttaaagtcatccagcagacgtttgag
gagatctctcagagtgtcctggcatcacttcaagaagacttcctgtggtccatggatgac
ttgtttcctgttttcttatatgtggtgctacgggccaggattaggaatttaggttccgag
gtacacctcattgaggacctaatggacccctatcttcagcatggggaacagggtataatg
ttcaccaccttgaaggcatgttactaccagatccagcgtgagaagcttaactag
DBGET
integrated database retrieval system