Equus caballus (horse): 100066264
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Entry
100066264 CDS
T01058
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04820
Cytoskeleton in muscle cells
ecb04926
Relaxin signaling pathway
ecb04933
AGE-RAGE signaling pathway in diabetic complications
ecb04974
Protein digestion and absorption
ecb05146
Amoebiasis
ecb05165
Human papillomavirus infection
ecb05200
Pathways in cancer
ecb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100066264 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100066264 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100066264 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100066264 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100066264 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
100066264 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100066264 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
100066264 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100066264 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
100066264 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100066264 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100066264 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100066264 (COL4A2)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100066264 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100066264 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100066264
NCBI-ProteinID:
XP_023477593
Ensembl:
ENSECAG00000021314
VGNC:
16739
UniProt:
A0A3Q2I3N3
LinkDB
All DBs
Position
17:77583106..77774442
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AA seq
1712 aa
AA seq
DB search
MDRHQCAASSPALRRWLLLGFVTVGLLAHSVLGGVKKFDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGPPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTRGDAGPQGPSGSGGFPGSPGPQGPKGQKGEPYALSSEDRD
KYRGEPGEPGLVGFQGPPGRPGPVGPMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGKKG
EKGDMGQPGPNGLPSDTHHAIIGPTKEVFHPDQYKGEKGSEGEPGRQGISLKGEEGIMGF
SGARGAPGFDGEKGSPGQKGSRGLDGYQGPDGRPGPKGEVGDRGLPGPPAYSPHPSLGKG
ARGDPGFPGAHGEPGTRGEPGDPGPPGLPGTSIGDEDEKRGLPGEMGPKGFIGEPGLPAL
YPGPPGADGKPGLQGPPGPAGPPGPDGFLFGLKGTGGTAGYPGPSGFPGARGQKGWKGDA
GDCRCVEGDEFVTGLPGLPGPKGFPGINGEPGRKGGQGDPGQHGIPGFPGFKGAPGDIGP
PGPKGVKGDSRTVTTKGERGQPGVPGVPGMKGDDGIRGRDGLDGFPGLPGPPGDGIKGPP
GDTGHPGAPGTKGIPGERGPPGLGLPGPKGEHGFPGDAGFPGPPGLPGPPGPPGSPGLLD
CDAGVKRPIGGDGQETVQPGCVGGPKGSAGQPGPPGPTGAKGLRGIPGFSGADGPPGLKG
LPGDPGREGYPGPPGFVGPRGSKGAVGLPGPDGQPGLTGLPGPVGPPGDRGLPGEALGAY
PGPQGDAGLPGQPGLKGPPGERGPPGFRGSQGMPGMPGLKGQPGFPGPSGQAGLPGPPGQ
HGFPGAPGQQGPLGLPGAPGFGGLPGDRGDPGDTGVPGPVGMKGVPGDRGDPGLLGDRGH
PGSPGFKGVAGMPGIPGPKGGRGSPGMDGFQGLLGLKGRPGLPGSKGEAGFFGVPGLKGL
AGEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGVPGMPGIPGLS
GIPGLPGRPGHIKGVKGDIGVPGVPGVPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGL
YGESGPTGDFGDIGDTIDLPGSPGLKGERGLTGTPGLKGFFGEKGTEGEVGFPGITGAVG
VQGPPGLKGQTGFPGLTGLHGPQGEPGRVGRPGDKGDSGWPGVPGLPGFPGIRGISGLHG
LPGTKGSPGSPGADIHGDPGFPGPAGDRGDPGEANTLPGPAGAPGQKGERGAPGERGPVG
SPGLRGFPGITPPSNISGSPGDKGAPGIFGLEGYRGPPGPPGPAALPGSKGEEGNPGVTG
NPGTKGWGGDPGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTGSVGDRGPKGPKGDRGLPG
TPGAVGSPGIAGIPQKIAIQRGPVGPQGRRGPPGAQGEMGPQGPPGEPGLRGAPGKAGPQ
GRGGVSAVPGFRGDQGPMGHQGPIGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
NDKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
EQSFQGAPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggacagacaccagtgcgcggcgtccagccctgccctgcggcggtggctgttgctgggg
ttcgtgacagtggggctcctggcccacagcgtccttgggggtgtgaagaagtttgatgtg
ccctgtggagggagagactgcagtgggggctgccagtgctaccccgagaaaggaggacgg
ggtcaaccagggccagtgggcccccaggggtacaacgggcccccagggttacaaggattc
ccaggactgcagggccgcaaaggtgacaagggggaaagaggccctcccgggatcacagga
ccaaaaggagatgtgggagcaagaggcgtttctggattccctggtgccgacgggattccc
ggacatcctgggcaagggggacccagaggaccgcctggctatgatggctgcaacggaacg
aggggagacgccggcccgcagggaccctccggttctgggggcttccctggctctcctgga
ccccaaggacccaaagggcaaaaaggtgaaccttacgcactgtctagcgaggaccgagac
aaatacaggggtgaacctggggagcctggattggtcggcttccaggggcctcccggccgc
cccgggcctgtgggaccgatggggcctgttggagctccggggagaccaggaccgcctgga
ccccctggaccaaaaggacagcaaggcaacagaggacttggtttttatggaaaaaagggt
gagaagggcgacatgggccagccaggacccaatgggcttccatcagacacccaccatgcc
atcatcgggcccacgaaggaagtgttccacccagatcagtataagggtgaaaaaggaagt
gagggggaaccaggaagacaaggcatttccttgaagggagaagaaggcatcatgggcttc
tctggagcgcggggtgcccctggcttcgatggtgaaaaaggctcaccaggacaaaaagga
agcagaggactggatggttatcaaggccctgatggacgcccgggacccaagggagaagtg
ggtgaccgaggcctgccgggaccgcctgcctactcccctcatccttccctggggaaaggt
gccagaggtgacccaggattcccaggagcccatggggagccaggaacccggggtgagcca
ggagaccctggcccgccaggcctccctggcacgtccatcggagatgaagatgagaagaga
ggcttaccaggcgaaatgggacccaaaggcttcataggagagccaggcctccctgcgctc
taccccggccccccgggagctgacggaaagccagggctccaaggacccccagggcccgcc
ggaccacctggacccgatggtttccttttcggccttaaaggaacaggagggacagcgggc
taccccgggccttctggtttccctggggctcgtggacagaaaggatggaaaggtgacgcc
ggcgactgcagatgtgtagagggtgatgagttcgtcacgggtctgccggggctaccaggg
cccaagggctttccaggcatcaatggggagccgggcaggaaagggggccaaggagatcct
ggccagcacggcatccctgggttccccgggttcaagggagcccctggtgacattggacct
cctgggcccaaaggagtgaagggagattccagaacagtaaccaccaaaggtgagagggga
cagccaggtgtcccaggggtgcctggaatgaaaggtgacgacggcatccgggggcgtgac
gggctcgatggattcccaggccttccggggccccctggtgatggcatcaaaggaccccca
ggggacacaggtcacccaggagcacccggcacaaagggcattccaggagaaaggggtcct
ccaggattgggcctgccaggccccaaaggcgagcatggtttccccggagatgctggattc
cctggaccaccaggcctccccgggcctcctggccccccaggctctccaggactcctagat
tgtgatgcaggcgtgaaaagacccatcggaggtgacggacaggagactgtccagccaggt
tgtgttggagggcccaagggatcggcaggccagccaggacccccaggccccacaggtgcc
aaaggcctcagagggataccaggattctcaggagcggatggacccccagggctcaagggt
ctcccaggagacccaggacgtgagggatacccaggacccccagggttcgtggggccccga
ggatccaaaggtgcagtgggcctccctggcccggatgggcagccaggtctcaccggcctg
ccagggccagttgggcctccaggagacaggggccttcccggagaagccctgggagcctac
cctgggccccagggagatgccggcctgcctggacagcctgggctgaaaggccctccagga
gagcgaggcccacctggattcaggggaagccaggggatgccaggaatgccaggcctgaag
ggtcagcccggcttcccaggaccctcgggccaggcaggactgcccgggccaccaggacag
cacggcttcccaggagctcctggccagcaggggcccttggggctcccgggcgccccaggc
tttggaggtctacctggagacagaggggacccaggcgacacaggtgtccctggccctgtg
ggcatgaagggtgtccctggtgacagaggtgaccccggtttgttgggcgatagaggtcac
ccaggaagccctggattcaaaggagtggccggaatgcctggcatccctgggccaaaaggg
ggcagaggttcacccgggatggacggcttccaaggcctgctggggctcaaaggacgaccc
gggctcccagggagcaaaggagaggctggattttttggagttccggggctgaagggtctg
gctggtgagccgggtgtgaaaggcagccgaggggaccctggccccccaggaccgcctccc
atcatcctgccgggaatgaaagacatcaagggagagaaaggagatgaaggacccatggga
ctgaaaggatacctgggcctaaaaggtgttccaggaatgcccgggatccctggcctgtcg
ggcatccccgggctgcccgggaggcccggccacatcaaaggagtcaaaggagacatcgga
gtgcccggtgtgcctggcgtgccaggattcccgggggtgcccggtcctcccggcatcata
gggtttcccgggttcacaggaagtaggggtgacaagggagctccggggagagcaggcctg
tacggcgagagtggccccacaggcgatttcggtgacattggagacaccatagatttacca
ggaagcccgggcctgaagggggagcggggcctcactggaacaccaggtctaaagggattc
ttcggagagaaaggaacagagggcgaagtcggcttcccggggataacaggcgccgtggga
gtccaagggccccccggactgaaagggcaaacaggctttccaggactgacggggctgcac
gggcctcagggagagccaggtcgggttggaaggcctggcgacaaaggagactctggctgg
ccaggggttcccggcttaccaggttttccgggcatccgaggcatcagcggattacacggc
ctgccaggcaccaaaggctcccccgggtccccaggtgcagacatccacggagacccaggt
ttcccaggtcctgctggggacagaggtgacccaggagaggccaacacccttccaggccct
gcgggagccccaggacagaagggggagcgaggagccccaggggagcgaggcccagtcggg
agtccaggacttcggggtttcccaggcatcacccccccttccaacatctctgggtcacct
ggtgacaaaggggcgccggggatattcggcctggaaggttatcgaggtcccccagggcca
cctgggcctgctgctcttcccggaagcaaaggagaggaggggaacccaggagttacagga
aacccagggaccaaaggatggggcggagaccctgggccccaaggccggcctggcgtgttt
ggtctcccaggagaaaaagggcccagaggtgagcaaggattcatggggaacacaggaccc
accgggagcgtgggcgaccgaggccccaagggacccaaaggagaccgcggactcccgggt
accccaggtgctgtggggtccccggggattgcaggaatccctcagaagattgccatccag
cgggggccagtgggtccgcagggaagaagaggccccccgggggcgcagggagagatgggg
ccccagggccccccaggagaaccagggctccgtggggctccggggaaggcagggccccag
ggaagaggcggtgtgtctgccgttcctggattccgaggagaccaggggcccatggggcac
cagggaccaattggccaggaaggggagccaggccgcccggggagcccaggcctgcccggc
atgcccggccgcagcgtcagcattggctacctgctggtgaagcacagtcagacggatcag
gagcccatgtgccccgtgggcatgaacaagctgtggagtgggtacagcctgctgtacttt
gaaggccaggaaaaggcccacaaccaggacctgggactagcgggctcctgcctggcccgg
ttcagcaccatgcccttcctctactgcaaccccggcgacgtctgctactacgccagccgc
aacgacaagtcctactggctctccaccaccgccccgctgcccatgatgcccgtggccgag
gaggacatcaggccctacatcagccgctgctctgtgtgtgaggccccggccgttgccata
gcggtccacagccaagacgtctccattccccactgcccagccggatggcggagtttgtgg
atcggatattccttcctcatgcacacggccgcgggcgacgagggtggcggccagtcgctg
gtgtcaccgggcagctgtctggaggacttccgcgccacgcccttcatcgagtgcaacggg
ggccgtgggacctgccactactacgccaacaagtacagcttctggctcaccaccatcccc
gagcagagcttccagggcgcgccctccgccgacacactcaaggcgggcctcatccgcaca
cacatcagccgctgccaggtgtgcatgaagaacctgtga
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