Equus caballus (horse): 100066316
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Entry
100066316 CDS
T01058
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100066316 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecb04054
]
100066316 (DHX58)
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100066316 (DHX58)
Pattern recognition receptors [BR:
ecb04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100066316 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
TTRAP
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100066316
NCBI-ProteinID:
XP_023508283
VGNC:
51800
LinkDB
All DBs
Position
11:20868868..20877406
Genome browser
AA seq
677 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGTGKTRAAAYVAKRHLETVDGAKVVVLVNRVHLV
TQHCEEFSRMLDKRWTITTLSGDMGPRAGFGHLARHHDLLICTAELLQMALTSSEEEEHV
ELNAFSLLVVDECHHTHKDTVYNIILSRYLEHKLQRTLPLPQVLGLTASPGTGGASKLEG
AIDHILQLCANLDTWRIMSPQNHRPQLQEHSPQPCKQYDVCQRRSQDPFGDKLKNLMDQV
HDHLEMPELSRDFGTQMYEQQVVELSQTAAAAGLQQRRVYALHLRRYNDALLIHDTVRAV
DALATLQDFYDWERATKTQVLDAERWLLALFDEHKNELARLATCGPENPKLEKLEQILKK
QFRNENPRGIIFTRTRQSARSLLLWLQHQPGLQTVDIQAQTLIGAGNSSQSTHMTQREQQ
EVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGQSVYSF
VATEDSRELRRELTNEELEALMERAVAAVQEMDEAEYQAKIQDLQQAALVKRAAQAAQRE
SQRRQFLADEVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPNFSIYYKVSPKAVVIDREF
KDWKPGGAVSCRNCGESWGMQMIYKSVKLPVIKVRSMLLETPRGRVQAKKWSHVPFPVPD
FNYLQHCAQSLSDLSLD
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgattatgcctgccctggagggcaagaatatc
atcatatggctgcccacgggtactgggaagacgcgggcagctgcttatgtggccaagagg
catctggagactgtggatggagccaaggtggttgtattggtcaacagggtgcacctggtg
acccagcattgtgaggagttcagccggatgctggacaaacgctggaccatcacaaccctg
agtggggacatggggccacgagctggctttggccacctggcccggcaccatgacctgctc
atctgcacagctgagctgctgcagatggcgctgacaagctctgaggaagaggagcacgtg
gagctcaatgccttctccctgcttgtggtggacgagtgtcaccacacgcacaaagacact
gtctacaacatcatcctgagccggtacctagagcataaactccagaggacactgcccttg
ccccaggtgctgggtctcacagcttccccaggcactggcggggcctccaagctcgagggg
gccattgaccacatcctgcagctctgtgccaatctggacacgtggcgcatcatgtcaccc
cagaaccaccgcccccagctgcaggaacacagcccccagccctgcaaacagtatgatgtc
tgccaaaggcgcagccaggacccatttggggacaagctgaagaatctcatggaccaagtc
cacgaccatctggagatgcccgagttgagccgggacttcgggacgcagatgtacgagcag
caggtggtggagctgagccagactgcggctgcggcggggctccagcagcggcgggtgtac
gcgctgcacctgcggcgctacaacgacgcgctgctcatccacgacacggtgcgcgccgtg
gacgccctggccacgctgcaggatttctacgactgggagcgtgccactaagacgcaggtc
ctggatgccgagcgctggctgctggcgctgttcgatgagcacaagaatgagctggcccgc
ctggcaacttgtggcccagagaaccctaaactggagaagctggaacagatccttaagaag
cagttcaggaacgagaacccccggggcatcatcttcacccgaacccgccagagcgctcgc
tccctcctgctctggctgcagcaccagcctggcctgcagacagtggacatccaggcccag
acactgattggggctgggaacagcagccagagcacccatatgacccagagggaacagcaa
gaagtgatccgtaagttccgggtcggcaccctgaacctcctggtggccacgagtgtggcg
gaagagggcctggacatcccccagtgcaatgtggtggtgcgctatgggctcctgaccaac
gagatctccatggtccaggcaaggggccgtgcccgggctggtcagagtgtgtactcgttt
gtggcaactgaggacagtcgggagctgcggcgggagctgaccaatgaggagctggaggct
ctgatggaacgggcagtggctgctgtgcaggagatggatgaggctgagtaccaggccaag
atccaggatctgcagcaggcagccctggtcaagcgggcagcccaggcggcccagcgggag
agccagcggcggcagttcctggcggacgaggtgcagctcctctgcatcaactgcatggtg
gctgtgggctatgggagtgacctgcggaaggtggagggcacccaccacgtcaacgtgaac
cccaacttctcgatctactacaaagtctccccgaaggctgtggtcatcgacagagagttc
aaggactggaagcctgggggcgccgttagctgcaggaactgtggggagtcctggggtatg
cagatgatctacaagtctgtgaagctgccagtgatcaaagtccgcagcatgctgctggag
accccgcgagggcgggtccaggccaagaagtggtcccacgtgcccttcccggtacctgac
ttcaactacctgcagcactgtgcccagagcctgtcggacctctccctggactga
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