Equus caballus (horse): 100066373
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Entry
100066373 CDS
T01058
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
ecb
Equus caballus (horse)
Pathway
ecb05014
Amyotrophic lateral sclerosis
ecb05017
Spinocerebellar ataxia
ecb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100066373 (ATXN2L)
05017 Spinocerebellar ataxia
100066373 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
100066373 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100066373 (ATXN2L)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100066373 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
100066373
NCBI-ProteinID:
XP_023471820
Ensembl:
ENSECAG00000007301
VGNC:
15695
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All DBs
Position
13:20952698..20964713
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AA seq
1081 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLG
PAAVAGSGLRRGAESILAPPPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGATYEGIFKTLSSKFELAVDAVHRKASEPVGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSETRGINGGPSRMSPKAQRPLRGA
KTLSSPSSRPSAEASVPSPPAALSLFPVSRMYPPRSPKSAAPAPISASCPEPPIGSAVPT
SSASIPVTSSVDPGVGSISPASPKISLAPTDVKELPTKEPGRTLESQELSRIAGKVPGLQ
SEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLNSEPIGS
PVSKTESALDKEDKAPLPPAGGTEGAEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQVK
KSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIP
PIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAG
PPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQGSPRMLTSGSHPQAIV
SSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQ
HQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLP
HGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALS
ASTPSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRADGLQVGQDARVLGG
E
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcccggaggcaccagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcccccagggcctcccgcggctgcttccccctgcctgggg
cctgcagccgttgccgggagcgggctccgccggggagccgagagcatcttggcgccgcca
ccaccgccgccgcagcagcagcatcaggagaggccaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacccccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcatttccttacagctgttgtgggctccacctgtgatgtaaaggtg
aagaatggtgccacctatgaaggtatcttcaagactttgagctcaaagtttgaactagca
gtagacgctgtgcaccggaaagcatctgagccagtaggtggccctcgtcgggaagacatt
gtggacaccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgttgac
ttcaattatgctactaaagacaagttcactgattcagccattgccatgaactcgaaggtg
aatggggagcacaaagagaaggtgcttcagcgctgggaggggggtgacagcaacagcgat
gactacgacctcgagtctgacatgtccaatggatgggatcccaatgaaatgttcaagttc
aatgaggaaaactatggtgtaaagactacctatgacagcagtctctcttcttatacggtg
cccttagagaaggacaactcagaagagtttcgtcagcgggagctacgagcggcccagttg
gctcgagagattgaatcgagccctcagtaccgcctgcggattgccatggagaacgatgat
gggcgcactgaagaggagaagcacagtgcggtccagcggcagggttcaggacgagagagc
cccagcttggcatctagggagggaaagtatatccctctaccccagagagttcgggaaggt
ccccggggaggcgttcgatgcagtagttcccggggcggccgacctggccttagctctttg
ccgcctcgtggccctcaccatcttgacaatagcagccctggcccaggttctgagacacgt
ggtatcaatggaggcccttcccgcatgtcccctaaggcacagcggcctctgagaggtgcc
aagactctgtcttcacccagcagtaggccttctgcagaagcttctgttccatctcctcct
gcagctctctctctttttccagtgagccgaatgtacccaccacgctctcccaagtcggct
gcccctgccccaatctcagcttcctgtcctgagcctcccattggctcagcagtaccaact
tcttcagcttccatccctgtgacatcatcagttgatcctggagtaggctccatttccccc
gcttctccaaagatctcactggcccccacagatgtaaaagaacttccaaccaaggaacct
gggagaactctggagtcccaggagctgtcccggatagctgggaaagtccctggccttcag
agtgaacagaaacgctttcaactggaggaactgagaaagtttggggcccagtttaagctt
cagcctagtagctcccctgagaccagcctggatccttttcctccccggatcttaaaggag
gaggccaaagggaaggagaaggaggttgacggtctactgaattcagagcccatagggtcc
ccagtctccaagacagagtctgcattggataaagaggacaaagcacccctgccgccagca
ggaggcactgagggggcagagcagcccccgccgccttgcccaagccaaactggcagcccc
ccagtgggcctcatcaagggagatgacaaggatgagggccctgttgctgaacaagtcaag
aagtcaaccttgaaccccaatgccaaggagttcaatcccacaaagcctctgctgtctgtg
aataaatccaccagtaccccaacttctccagggccccggactcattcaactccctccatc
ccggtgctgacagcaggccagagtgggctctatagcccccagtacatttcctacatacct
ccgatccacatgggaccagctgttcaggcacctcagatgtatccatatcctgtatccaac
tcagtgcctggacagcagggcaagtaccggggagcaaaaggctccctgcccccacagcgc
tcggaccaacaccagccagcttcagcccctccgatgatgcaggccgctgccgctgctggc
ccacctctggtggctgccacaccttactcttcctacatcccatacaacccacagcagttc
ccaggccagcccgccatgatgcagcccatggcccactatccttcacagccggtgtttgcc
cccatgcttcaaggcagcccacgcatgctgacgtcagggagtcatccccaggccattgtg
tcgtcctccacccctcagtacccttctgcagagcagcccactccccaagccctttatgcc
actgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccgcagccg
gccaccacacctactgggagccagccgcagtcccagcatgcggcccccagtcccgtccag
caccaggcggggcaggccccacacctgggcagtggacagccacagcagaatctgtaccac
ccaggggccctgacaggcacaccgccttctctgccaccggggccttctgcccagtcccct
cagagcagcttcccccaaccagccgctgtgtatgccatccatccccaccagcagctgccc
cacggcttcaccaacatggcccacgttacccaggcccatgtccaaactggaatcacagca
gccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcacccaccc
cagagccatgggggccccccccaaggcgcggtgccccagagtggggtgcctgcactctca
gcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcctggccag
gcgcctggatttccaggaggagccgatgacaggattcgtgagttctcgttagctggggga
atttggcatggaagagctgatgggctgcaggtggggcaggatgcacgggttctgggtggg
gagtga
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integrated database retrieval system
